Desulfosarcina variabilis: Dvar_61890
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Entry
Dvar_61890 CDS
T10869
Name
(GenBank) LcfA2: long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00061
Fatty acid biosynthesis
dvr00071
Fatty acid degradation
dvr01100
Metabolic pathways
dvr01212
Fatty acid metabolism
dvr02024
Quorum sensing
dvr04146
Peroxisome
Module
dvr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dvar_61890
00071 Fatty acid degradation
Dvar_61890
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dvar_61890
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dvar_61890
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dvr01004
]
Dvar_61890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvr04147
]
Dvar_61890
Enzymes [BR:
dvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dvar_61890
Lipid biosynthesis proteins [BR:
dvr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dvar_61890
Exosome [BR:
dvr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dvar_61890
Exosomal proteins of breast cancer cells
Dvar_61890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
XPS88171
LinkDB
All DBs
Position
6913939..6915630
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AA seq
563 aa
AA seq
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MSASNPYLAKPWLNHYESGVLEHIQYEPICLPDCLKRSAKRFPDKMALSFQGYQITFSKL
DEMVDRFATCLIDFGIQKGDSVAILLPNTIPCVVAYFASMRIGAITVMNNPLYSDRELYH
QFTDAEAKVLITLDLLGNRMIDLRPQTQIKQIVITSIGDYLPFPKNLLFPLIGKKKGLAA
KVKPAEDVYQWKTLLSRHAPPPAHVPLDFEDVAMYQYTGGTTGVSKGVMLTHGNLSKQIQ
QICAWFPQFGPDEIMLGALPFFHVFGLSTAMNLAIYSGWGNILVPKPQPTQLLEAISKYK
PTFAPLVPTMYIGMLEHPKIESTDLTSIKGCFSGSAPLPIEVIHEFEKKTGSTIVEGYGL
TESCPVTHVNPFKGQRKIGSIGVPIPDTVCRIVDLKNGATDVPLGESGELLIKGPQIMKG
YWKRPDATAEALTDGWLHTGDIAQMDEDGYFYIVDRKKDLIISGGYNVYPRDIEEVFFEH
PKVMEATAIGIPHPKRGEAVKVFVVLKEGKQATTEELMAYCQDKLAKYKWPTEIEFRKDL
PKTNVGKILKKDLRAEELEKRQE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcaagcaatccatacctggcaaaaccgtggctgaaccattacgaatcaggcgtt
ctcgagcacatccaatatgaacccatctgcctgccggattgtttgaaacgatccgccaaa
cggtttcctgataaaatggcattgtcttttcagggctaccagatcactttttccaaactg
gatgaaatggtggatcgatttgcaacctgcctcatcgattttggtatccaaaagggagat
agtgtggcaatccttttgcccaacacgattccctgcgtagttgcttattttgccagcatg
cgcatcggtgccataacggtcatgaacaaccccctttattcagaccgggaactttaccac
cagttcaccgatgccgaagccaaagtactcatcacgctggatcttttaggcaaccgcatg
atcgatttacgccctcagacgcagatcaagcaaattgtcatcaccagcattggtgattac
ctcccatttcccaaaaacctcttgtttcccctgataggcaaaaaaaaggggctggccgcc
aaggtcaaacccgcagaagatgtctatcaatggaaaacgctgctatccaggcatgcaccc
ccccctgcccacgtgcccctggattttgaagatgtagccatgtaccagtacaccggtgga
accaccggtgtctccaaaggcgtaatgctgacccacggtaacttgagcaagcagatccag
caaatctgtgcctggtttcctcaattcggccccgacgaaatcatgctgggcgccctgccc
ttcttccatgtctttggtctgtccacagccatgaatctggcgatttacagcggctgggga
aatattctggtgcccaagccccaaccgacccaattgcttgaggccatcagcaaatacaaa
cccaccttcgcgccgcttgtgccgaccatgtacattggcatgcttgaacaccccaagatt
gaaagcactgacctgacgtcgatcaaaggctgtttttccggtagcgcccccctaccgatc
gaggtaatccatgaatttgagaaaaaaaccggttctaccatcgtcgaagggtatggcctg
accgaatcgtgtccggtaacccacgtaaatccgtttaaaggtcaacgcaaaatcggaagc
atcggcgtgccgatcccggacacggtatgccgaattgtcgacttgaaaaacggtgcaacc
gacgtgccgctgggcgaaagcggggaactgttgatcaaagggccgcagatcatgaaaggc
tattggaaacgacctgacgcgacggccgaggccctgacggatggctggttgcacaccgga
gatatcgcccaaatggacgaagacggctatttttacattgtggatcgaaaaaaagatctc
atcatctccggtggatataatgtctacccccgggatatcgaagaagtctttttcgaacac
cccaaagtaatggaagccacggccatcggcattccccatcccaaacgcggtgaagcagtc
aaggtctttgtggtgttaaaagagggcaagcaagcaaccaccgaggaactgatggcctat
tgccaagacaaactggccaaatataaatggcccacggaaatcgagttccgcaaggatctg
cccaaaaccaatgtgggcaagatcctgaaaaaagatctcagggccgaggaactggaaaag
cgccaagaataa
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