Desulfosarcina variabilis: Dvar_62470
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Entry
Dvar_62470 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_62470
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_62470
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
XPS88228
LinkDB
All DBs
Position
6981469..6983448
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AA seq
659 aa
AA seq
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MVVIMAVFCCQPVWAQGDTAVDKKSKSGAHIGDITITATKMATTVDNIPTNIAVISREKL
EQYPGHYNALTVLRDMNIPGMYFVGTDRGSTSGDISMSSRGGEVSNWAMKVMINGIEFNP
GIGYVRSGSLAIHDIERIEITKTPSAEYGDQAIGGVINIITRTANKPVEASAGLAFSSLG
GGNGYSVINGVKEKWQYYIDASAVREDAYQDGGYLHGDNVYAMTRYAVSDDADISLHGSF
RDSKGNFTQALTRQQFEEDPSQNPITGADYHNETEGILGALVYTQQLGPHTLMAKAEMED
TNFQLYWGAYVDQEGWQAHPEVNVTLNHDIAGMVNKLVVGGEYRYHDMTAKRYMATSFYD
IGEINRDFSRKDISYAGYLQDELCMTDRLTVSAGLRYDYFDLEQVANIASSDSWDQAKGD
VSPKIGFTYQASKAVNLFAGLNSGIKSPVRLPMWYTNGELDPERLWAYEAGLRGNISSWL
DYNVALFWQDVTDKFVRSGSDLSAQYENAGETTAKGVEVGANARLPHGFYASTSFTWQQS
EFDEFVSRGVDYSGNKLTGVPDIMFAFKLGFRDEMLGDISLNPVYTGKRYFNYANTTEED
GFWILNARYAKQIGAAELYLVANNVFGEDAVGSGSGNPGDESLYPLPGFNAIFGLNVRF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatcatggccgtgttttgctgtcagccggtatgggcccagggtgatacagcg
gttgataaaaagagcaagtccggtgcgcatatcggcgatatcaccattaccgccaccaag
atggccacaacggttgacaacattccaaccaatatcgcggtcatatcccgtgagaaactg
gagcagtatcccgggcattacaatgcgctcaccgtgctgcgggacatgaatataccgggc
atgtattttgtcggcacagacaggggatcgaccagtggcgatatctcgatgagcagccgc
ggcggcgaagtgtcgaactgggccatgaaggtaatgatcaacggcatcgagtttaatccg
ggaattggatacgtgcgctccggcagcctggccatccacgatatcgaacgcatcgaaatc
accaaaacgccgtcggccgagtatggagaccaggccatcggcggtgtgatcaatatcatc
acccgaacagccaacaaaccggtggaggccagcgcgggtctggcgttcagcagcctgggc
ggcggcaacgggtatagtgtcatcaatggcgttaaagagaaatggcaatactatatcgat
gcatctgccgtacgcgaggacgcgtatcaggatggcggctatctccatggcgataacgtt
tatgccatgacgcgatacgccgtaagtgatgatgccgacatttccttgcatggatctttc
cgcgactcaaagggaaattttacacaagcgctgacccggcagcagttcgaggaagatcct
tcccaaaatccgattaccggcgctgattatcacaacgagaccgaaggcattttgggcgcc
ctggtgtacacccagcagctgggaccgcatacactcatggccaaagcagaaatggaagac
accaattttcaattatattggggagcttatgttgaccaggaggggtggcaggcgcacccg
gaggtgaatgtgaccttgaaccacgatattgccgggatggtcaacaagcttgttgtcggc
ggggagtatcgctaccacgatatgacggcaaaaagatatatggcaaccagtttttacgat
atcggggagattaacagagacttttcacgcaaagatatcagttatgcggggtatctgcag
gatgagctgtgcatgactgacaggctgacggttagcgccggtcttcgctatgactatttt
gatctggagcaggtcgccaatatcgccagcagcgattcctgggatcaggccaaaggcgac
gtcagccccaagatcggctttacctatcaagccagcaaagcagtgaacctgtttgcaggg
ctcaacagcggaataaaaagtccggtcaggctaccgatgtggtacacgaacggtgagctg
gatccggaaaggctctgggcttatgaagcgggtttacgcggcaatatctccagctggctg
gactacaacgttgcccttttctggcaggatgtcaccgataaattcgttcgatccggatcg
gatttgagtgcgcaatacgaaaacgccggcgaaaccaccgcaaaaggggtcgaggtcggc
gccaatgcaagattgccccacggcttctatgcctcgaccagctttacctggcagcaatcc
gagtttgatgaatttgtcagccggggcgttgattattccgggaataagttgaccggcgtg
ccggatatcatgtttgccttcaaactgggttttcgcgatgagatgttgggcgatatttcc
ctgaatcccgtgtatacgggaaagcggtatttcaactatgccaataccaccgaagaagat
gggttttggattctcaatgcaagatacgcaaaacagatcggcgcagccgaattgtacctt
gtggccaacaatgtttttggtgaagatgcggttggcagcggcagcggtaatcccggtgat
gaatctctctatccattgccggggttcaatgcgatctttggtttgaatgtgcgtttttag
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