Desulfosarcina variabilis: Dvar_62820
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Entry
Dvar_62820 CDS
T10869
Name
(GenBank) CirA: TonB-dependent receptor CirA
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_62820
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_62820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
XPS88263
LinkDB
All DBs
Position
complement(7024750..7026660)
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AA seq
636 aa
AA seq
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MKRWILMAGLMLTLIPEGLLAGQNGSDGSGDMVDAGKVVVTATMTEKRVADVPGAVEVIT
GQELIEMNAQTVADALAEATGLVVTTETGRQKRPSIRGTGNNHTLLLIDGRRLAAGFKDL
LGLEQIPMDMIERIEVVRGPASALYGSDAIGGVVNVITKTPSRDLSMGLTAQYGQSIYHE
GQEAIGSAYLSDTWGRLGMLLAGGYRDKDGYDRDGVPPDDGDDIEFGSGGGRISFDLNDH
HRLLTGLEVVDRNAGGLRNIEQMDRQRDADDRRLNYFLEYAGHPTDLSSLMLRVNHSEHE
NDYDFDPPTSLIAGGIGDETHAQRRLDQAEGRFSGMFFSRHLVTIGGEYREEGREDDSGL
DEDIDNLSAYLQDEIQVVDPLYLVLGVRWDDHSDFGSQWTPRVSMTYSILSHLRLKAGYG
EGFRAPGFLELYVPTYMKCGKQVFEPNADLTPETSKSYEIGFEGEYRRFSGRVMAFKNSI
EDMIEAVYYSSSGTGRSKKDYYQYQNIGDATISGVEAEWTLGLPMGFDLSGNLAYLDAEN
GDTGEELEGRPDYKGALKLAYHHADMGLKANVRVEYIGERYYADEPEDDVTLVHAYLSKQ
IMKNVMLFAGIDNIFDTGADSDIEPTFYYGGVSLRY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtggatattgatggctggcttgatgttgacactgattccagaagggctgttg
gccggccaaaatggcagcgatgggagtggcgacatggtggacgcaggcaaagtggtggtg
acggcgaccatgactgaaaagcgggtagcggatgtgccgggtgcggtggaggtcattacc
ggccaggaactgatcgagatgaatgcacagaccgtggccgatgcgctggccgaggcgacc
ggtctggtggtgaccaccgaaaccgggcgtcagaaacggcccagcatccggggtaccggc
aataaccataccctgctgttgattgacggccgccggctggccgccgggttcaaggatttg
ctcgggttggaacagatccccatggacatgatcgagaggatcgaggtggtgcgcggtccc
gcatcggccctttacggcagcgatgccatcggcggtgtggtcaatgtcatcaccaaaacg
ccgtcccgggacttgtccatgggactcaccgcccagtacgggcaaagcatttatcatgaa
ggacaggaggcgatcggcagcgcctatttgagtgacacctgggggcgcttgggaatgttg
cttgccggcggatatcgggacaaggatggctacgaccgggacggggtgcccccggatgat
ggcgacgacatcgaattcggatctggtggggggcggatctcctttgatttgaacgatcat
catcgtttgctgacaggcctcgaggtggttgaccggaatgccggcggactgaggaatatc
gagcaaatggaccgtcagcgggacgccgatgatcgtcgcctcaattactttctggagtat
gccgggcatcccacggacctgtcctccctgatgctgcgcgtgaaccattccgaacacgaa
aacgactatgatttcgatccgcccacatccttgattgccggtggcattggcgatgaaacc
catgcccaacgccggctggatcaggcggagggccgtttcagcgggatgtttttcagccgt
catctggtgaccatcggcggcgaataccgtgaggaggggcgtgaggacgattccggtctg
gacgaagatatcgacaacctgagtgcttatttacaggatgaaatccaggtggtcgatccg
ttgtatctggtattgggtgtacgctgggacgatcattcggatttcggctcgcagtggact
ccccgcgtctccatgacttacagcatcctttcgcatttaaggctcaaggccggttatgga
gaggggtttcgtgcacccggattcctggaactatatgtccctacctatatgaagtgcggc
aagcaggtgtttgagcccaacgccgatctcacgccggaaacatccaaaagttatgaaatc
ggcttcgagggagaatatagacggttcagcgggcgggtgatggcatttaaaaacagcatc
gaggatatgatcgaggcggtttattattcctccagcggcacaggaaggagcaaaaaggac
tactatcaatatcagaacatcggcgatgcgaccatttcgggggtggaggcagaatggaca
ttggggcttcccatgggcttcgatctgtccggaaacctggcctacctggacgcggaaaac
ggggacacaggagaagaactcgaaggccgaccggattacaagggggcgttgaagctcgct
tatcaccatgcggatatgggactcaaggccaatgtgcgtgtcgagtacatcggcgagcgc
tactatgccgacgaaccggaagatgacgttaccctggtgcatgcctacctgtccaagcag
atcatgaagaacgtgatgctgtttgccgggatcgacaatattttcgacaccggagcggat
agcgatatcgaaccgaccttctactatggaggcgtttcgctgcgttattag
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