Desulfosarcina variabilis: Dvar_63610
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Entry
Dvar_63610 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_63610
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_63610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
SlipAM
DUF6850
Motif
Other DBs
NCBI-ProteinID:
XPS88342
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All DBs
Position
complement(7127380..7129464)
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AA seq
694 aa
AA seq
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MSDRMRKPIKWIWGGWLLLFLWSATVCTADEAAYQLDSVTVTAEKREENVQDIPSTISVL
TETEIEDAGIETISDVIDMIPNMTINEGMGSYDEVTVRGLAASMFTGKNPVVLYVDGVPF
DKSMHFDMELLNIQRVEVLRGPQGTLYGKNAIGGVINVVTKRPDNTLTSKVGLQFAERET
YGLKGYVNGPLVKDKLFLGISGNYFETRGYMQNDHPDQDYLDNREKSSVHATLRWLPLER
LEVDLQAGVDRKRNGADVSIAPGAMQYHAYKEPDSEDDSDLFSSSLSLRYQTEYMAIHSI
TTYKARENDGSQDALYLNNGRSRSTDVSDISGGTQELRVQSPDAGNGWKWLVGFYYSDEE
QDYEDYSVTYDTTDYYGYDIKYNWPGEQSEETMAVFGQATLPLIDRLALTGGLRYERINK
ELDYQREVTRTDTGAQLSVDPFSGVSLPVVWEGEEDWDVILPKGVLSWDAQDNAMLYFSV
AKGYLAGGLNAWGDDEETAKFDAQTSWNYELGAKTNWLGNRLSMNAALFYIDIDDIHVYS
EPSPGVWIASNAAKAHSQGVELEVRARPLHGLDIGAAFGWVDAQFDEYGDYTDNTLQYIP
AYTLNVNIQYRFASGWFARAEMEGFGKTYYDEANTLDRSPFELFHAKVGYETAHWDLYLY
GNNLLDKEYFTSKSFSRNSVGEPRTIGVMASLRF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagaatgcgaaagccgatcaaatggatctggggcggttggttactccttttt
ctatggtcggcaacagtctgtacagccgatgaagcagcgtaccagttggacagcgtcacg
gtaacggctgaaaaaagagaagagaatgttcaggatattccatcgacaatatcggtgctt
accgaaaccgaaatcgaggatgcgggcatcgaaaccatcagcgatgtcatcgacatgatt
ccgaacatgacgatcaatgaaggaatgggcagctatgatgaggttactgtgcgcggactc
gctgccagcatgtttaccggtaaaaatccggtggtgctttatgtggacggggtgccattt
gacaagtcgatgcacttcgacatggaactgctcaatatccagcgggtagaagtgcttcgc
ggtccccaaggcacgctatacggaaagaacgccatcggcggggtgatcaacgtggtcacg
aaacggcctgacaatacgttgacctcaaaggttggcctgcaattcgccgagcgcgaaacc
tatgggctcaaaggatacgtcaatgggccgttggtaaaagataaactgttcttgggtatt
tcgggtaattattttgaaacccgggggtatatgcaaaacgatcatccggatcaggactat
ttggataatcgggaaaaaagctcggtccatgcgaccttaagatggctgccgctggaacgg
ttggaagtcgatctgcaggccggcgtggatagaaaacgcaacggggcggatgtcagcatt
gccccaggcgcgatgcagtaccatgcatacaaagaacctgacagtgaggatgactcggac
ctgttcagttcatctttaagtcttcgctatcagacagagtatatggcgattcattccatc
actacatacaaggcgcgtgaaaacgacgggagtcaagatgccctctatctaaacaatggc
agatccagaagcacggacgtatccgatatctcaggcgggacccaggaacttcgtgtgcag
tctccggatgcgggtaatggatggaaatggctggtcggattttactactccgacgaagag
caggattacgaagattactcagtaacctacgacaccacggattattatgggtacgatata
aaatacaactggccgggagaacaaagtgaagagaccatggcggttttcgggcaggcgacc
ctgccgttgatagaccgtttggcgttgacgggcggtctcaggtacgaacgtattaacaaa
gaattggactaccagcgtgaggtgacacgaaccgacaccggagcgcagttgagcgttgat
ccgttttcaggcgtatccctgcccgtcgtctgggaaggtgaggaggactgggatgtgatc
ctgcccaaaggcgttttgtcctgggacgcccaggacaatgccatgctttacttcagtgtg
gccaagggatatctggccggcgggctgaatgcctggggtgacgatgaggaaacggccaaa
ttcgatgcccagacctcgtggaattatgaattgggggccaagaccaactggctgggcaac
cgcttatccatgaatgccgccctgttttacatcgatattgatgacatccatgtttacagt
gagccatcacctggtgtctggatcgcttccaatgccgccaaggcccatagtcagggggtg
gagctcgaagtcagagccaggccccttcatgggttggatataggggccgcatttggatgg
gtggatgcccagttcgatgaatacggcgactataccgacaataccctccaatacattcct
gcctataccctgaatgtgaacattcaataccggtttgccagcggctggtttgcgcgggcg
gaaatggaaggctttggtaaaacctattacgatgaagccaatacccttgaccgctcaccc
tttgaactgttccatgccaaggtcggatacgaaaccgcccactgggatctttatctctat
ggcaacaacctgttggacaaggagtatttcaccagtaaatcctttagccggaactcggtc
ggcgaaccgcgcaccattggtgtgatggcatcgcttcgattttag
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