Desulfosarcina variabilis: Dvar_65230
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Entry
Dvar_65230 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_65230
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_65230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XPS88504
LinkDB
All DBs
Position
7306944..7309028
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AA seq
694 aa
AA seq
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MGEWRSSTVMLRQYLHLSHMLLFLGMILLVIMLPISTVAHADARNPKTVEDPKITYLKGL
SIEALLKTEITSVSKKAEPLFDTASAVFVITQEDLRRTGARTIPDALRMVPGLQVAHINA
STWAITSRGFADWFSNKLLVMIDGRSVYTPLFSGVYWDVQDTMIADIDRIEVIRGPGATV
WGANAVNGVINIITKKASETQGGLVSVGAGTHAQPLVEARYGAHIADSADVRVYAKGFQR
EPFETTDGDDAHDAWKSMRGGFRADWQTAAKDDVTLDGQIYDGEGDLALDLSGFLTPPYS
RSLKETQTFSGGHLLSRWSRQWTADSELMLQAYYDRTHRNQVVAEEKRDTLDFEFKHHWD
PEGRHDVVWGLNYRWTRDDIVGTWNTTFDPDSRSDNLWSAFAQDDVMLVTDRLWLTLGSK
FEHNDYSGWEIQPNARLRLKPSADHMLWAAVSRAVRTPSRSDHDFRANLTSGADALGNVS
VFRIEGNEDFKAEELIAYEAGYRWQPNRRFYLDLAAFYNDYEQLRDVQNSSSPYLETAPA
PPHLVVPHLITNEMQGHTYGIETLATWKPVDIWQVSASYAYIELDLYSPNTDGSLPPEAE
TSPKHQFQVRSYLDLPWQLHLDSELYYVDRLKALDIDGYTRIDLRLEWNPTRQWALSIGI
ENLLDDAHTEFDDRAGVNASEVPRTVYGQATLRF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatggagatcgtcgacggttatgctacgtcaatatttacatttaagtcatatg
cttctgttccttggaatgatccttttggtcatcatgctacccatctcaacggtggcccat
gccgatgcgcgaaacccaaaaacagttgaagatccaaagattacctatctaaaggggctg
tccatcgaagccctactgaaaaccgaaatcacctccgtctccaaaaaggccgaaccgttg
tttgataccgcctcggctgttttcgtcattacccaggaagaccttcgccgcacgggggcg
cggacgattcccgacgcgctgcgcatggtgcccggccttcaggtggctcacatcaatgcc
agcacctgggccatcacctcacgcggctttgccgactggttcagcaacaagctgctggtg
atgatcgacggccgcagtgtctacacgcccctgttttccggtgtctactgggatgttcag
gatacgatgatcgccgatatcgaccgtatcgaggtgattcgcggaccgggggcgaccgtc
tggggggccaatgcggtcaacggcgtgatcaacatcatcaccaagaaagcctcggagact
cagggcggtctcgtatccgtcggcgccggcacccatgcgcagccgctggttgaggcccgc
tacggcgcacacatcgccgattcggccgatgtcagagtctatgccaaaggatttcaacgc
gagccttttgaaacgacggacggcgatgatgcccacgatgcctggaaatctatgcgcggc
gggttccgggccgattggcagaccgccgccaaagacgatgtgacccttgatggacagatc
tacgacggcgagggggacctcgcactggatctgtccggattcctgacaccgccctattca
cgctcgctgaaagaaacccagaccttttccggcggccacctgctgtcgcgctggtcacgc
cagtggacggcggattcagagctgatgctgcaggcgtattatgaccggacccatcggaat
caggtggtggcggaagaaaaacgcgacacccttgattttgaattcaagcatcactgggat
ccagagggccgtcacgacgtggtatgggggctgaattaccgttggacacgggatgatatc
gtcggcacctggaacaccacgttcgatccggacagccgtagcgacaacctgtggagtgca
ttcgcccaggacgatgtcatgctggtcaccgaccgtctgtggctgaccctggggtccaaa
ttcgagcacaacgactacagtggatgggaaatccagcccaatgcgcgcctgcgactcaaa
ccatccgcggaccatatgctatgggcggcagtatcgcgggccgtgcgaacgccatcgcgg
tcggaccatgactttcgtgccaatctgaccagcggggccgacgcgctcggcaatgtatcg
gtattccgcattgagggaaacgaggatttcaaggccgaagaactgatcgcatacgaggcc
gggtatcgctggcagcccaaccggcggttttacctggaccttgccgccttctacaacgac
tatgaacagttgcgtgacgttcaaaacagctcgtcgccatatctggagacggcacccgca
ccgccccatctggtcgtcccccacctgatcaccaacgagatgcaaggccatacctacggc
atcgaaaccctggcgacatggaaaccggtggacatctggcaggtttcggccagttatgcc
tatattgagctcgatctgtatagccccaatactgacggatctttgccacccgaggcggag
accagccccaaacatcagttccaggtacgttcataccttgatctgccatggcaattgcat
ctggattcggaactctattacgtcgaccgcctgaaggccctggacatcgatggctatacg
cgcattgatctgcgcctggagtggaatcccacacgccaatgggcgcttagtatcggcatc
gaaaacctgctggacgatgcccatacggaattcgacgatcgtgccggtgtcaatgcgtct
gaagtgccgcgcactgtctacggccaggctaccctgcgattctga
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