Desulfosarcina variabilis: Dvar_65920
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Entry
Dvar_65920 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_65920
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_65920
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XPS88573
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Position
7393186..7395150
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AA seq
654 aa
AA seq
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MKAIEMSKTVGKWFVFSIIVMASISSWEMVAFAESQAKENVQQLGVVTVTAPGSEQKVED
VQATIEIIDAEKIDSFSGRSLSQVLQQAGGIFVTDSGSTSSLTIRGFESGQALILVNGMR
RTGKYGSTDLNSIQLEDIERIEIVRGPMSALYGSDAMSGVVNIVTRKAGDEKSLSAKLIG
GMAQNGDRETVIVRATGNLGAIGNTHHRLSTEIKRRGDYRIEEDQPYTSLKDEERLFFSY
SGDYAVNDGHFLRWHAEYGNQDDEGISSSSNLGYPATYEKEDRIQLDAQYRQTWQQSTID
LSIGYGNADTESERTDGPEFTDYDQYEANGVWTLFADNDRHTVSLGAGASHEQIELSILT
ERPDRDVYHGFLQDQWQIVNDVTLVGGVRYDHYSDFGDALNPKISLSWAPGNYTARVGYG
TAFKAPAYTSMYSYFERSAGRSTSIIYGNPDLEPEESQTLEAAVGYRAKRFSMEGVYHFN
KLKNLIDAQLTDTSTDASGARTTEYLYVNVSKAEISGVELTLNADILDNWQISASWEYLD
KKDDDTDERLTGYARSTAKIGSTISMGGFALHAYYRWLHDYYGSDPNLPRGSDPVNSTFD
VVDVKLDYRFFDHHLLSVGVDNLLDKETPANFTRGASPLDPGERYYYLGYSINY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgattgaaatgagcaaaacggtcggcaaatggtttgttttcagtatcatcgtg
atggcgagtatctcatcgtgggaaatggtggccttcgccgaaagccaggcgaaggaaaac
gtccagcagctgggcgtcgtcacggtgacggcccccggatcggaacagaaggtcgaagat
gttcaagccacaatcgagatcatcgatgcggaaaagatcgacagcttttccggacgcagt
ctttctcaagtgctgcagcaggccggcggtattttcgtcaccgacagtggcagtacctcc
agtctgaccatccggggattcgaaagcggccaggcgctcattctggtcaatggcatgcgt
cgcaccgggaaatacggatccacagatctgaacagcattcagttggaggatattgagcgg
atcgaaatcgtgcgtggccccatgtccgccctttacgggtcggatgccatgtccggcgtc
gtcaacatcgtgactcgcaaagccggtgatgagaagtcgttgagtgccaaactcattggc
gggatggcgcaaaacggggaccgggagacagtcattgtccgggcaacgggtaatctgggc
gccattggcaatacccaccaccggctgtcaacggagattaaacgccgaggcgactaccgg
atcgaagaggatcagccctacaccagcctgaaggatgaagagcggctttttttctcctat
agcggagactatgccgttaatgacggccactttctgcgctggcatgccgaatacggcaac
caggatgatgaagggatcagttccagcagcaacctggggtatcctgccacctacgagaag
gaggaccggattcaactggatgcccaatataggcagacgtggcaacagagtaccattgat
cttagtatcggttacggcaatgcagatacggaatccgaacgaaccgacggcccggaattt
accgattacgaccaatatgaagccaacggggtatggaccctttttgctgacaacgatcgg
catactgtcagtttaggggccggtgccagccacgaacagatcgagctttcgatccttacc
gagcgccccgatcgagatgtctaccatggtttcctgcaggatcagtggcagattgtaaat
gacgtgacgttagtcggcggtgtccgttacgatcactacagtgatttcggcgatgccctc
aatccaaagatttccctttcatgggctccgggtaattatactgcacgtgtcggctatggc
accgcttttaaagcgcccgcctataccagtatgtatagctatttcgagcgcagtgccggt
cgcagcaccagtatcatctatggcaatcccgatctcgaaccggaagaatcccaaaccctg
gaagcggccgtcggctaccgcgccaagcgcttcagtatggaaggcgtttaccatttcaac
aaattaaaaaatctgattgatgcgcagctcactgatacatccacggacgccagcggcgca
cgcacaactgaatatctgtatgttaatgtgagcaaggcggaaatctcgggcgtcgagttg
accctgaacgcagatattctggataactggcaaatcagcgcatcctgggaatatcttgat
aaaaaagacgatgacacggacgaacgcttgaccggctatgcgcgcagcactgctaaaatc
ggcagcacgatcagcatgggcggatttgccctgcatgcctattatcgctggctgcacgac
tactacggttcggatcccaatctgccccgtggctccgacccggtgaattccacctttgac
gttgtcgacgtcaagctggactaccggtttttcgatcaccatctgctcagtgtaggggtc
gacaacctgctcgataaggaaaccccggccaattttaccagaggcgcatcaccgctggat
ccgggcgagcgctattactatttaggctacagcatcaattattaa
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