Desulfosarcina variabilis: Dvar_66660
Help
Entry
Dvar_66660 CDS
T10869
Name
(GenBank) HupA1: DNA-binding protein HU 2
KO
K05788
integration host factor subunit beta
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvr03032
]
Dvar_66660
03036 Chromosome and associated proteins [BR:
dvr03036
]
Dvar_66660
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_66660
DNA replication proteins [BR:
dvr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Dvar_66660
Chromosome and associated proteins [BR:
dvr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Dvar_66660
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Dvar_66660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Glycos_trans_3N
DUF5666
Motif
Other DBs
NCBI-ProteinID:
XPS88647
LinkDB
All DBs
Position
7485273..7485635
Genome browser
AA seq
120 aa
AA seq
DB search
MNKIELIQALKDATDLTKSEAATVLDLSFNGMADALAKGDRVEIRGLCSFFVKEYDGYTG
RNPKTGERVKIKPKKLPFFKPGRISHSEMGRARKHSADRICPTTQRHRIKHPSQLVRRLP
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatcgaactgatccaggcattgaaggacgccaccgacctaaccaaatccgag
gctgccaccgttcttgacctttctttcaatggaatggccgatgcattagccaaaggggac
cgtgttgaaatccggggattgtgttcatttttcgtcaaagaatatgatggatacaccggc
cggaatcctaagaccggggaacgcgtcaaaattaaaccgaagaaactgccgttctttaaa
ccgggtaggataagtcatagcgaaatgggtagggcacgaaaacattccgccgatcgtata
tgtcccaccacacaaagacaccgaataaagcatcccagtcaattggtacgccgacttccg
taa
DBGET
integrated database retrieval system
