Desulfosarcina variabilis: Dvar_66830
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Entry
Dvar_66830 CDS
T10869
Name
(GenBank) RadA: DNA repair protein radA-like
KO
K04485
DNA repair protein RadA/Sms
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_66830
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dvar_66830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
DUF7125
RecA_N
nSTAND_NTPase5
AAA_16
GvpD_P-loop
AAA_24
nSTAND3
AAA
AAA_22
KdpD
PAXNEB
IstB_IS21
Rad51
SLFN-g3_helicase
NTPase_1
AAA_30
DAP3
NPHP3_N
DUF7129
Motif
Other DBs
NCBI-ProteinID:
XPS88664
LinkDB
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Position
7504345..7505709
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AA seq
454 aa
AA seq
DB search
MARKSIKTLFVCQACGYESAKWLGRCTECGGWDTFVEAVKKPKTSGVRSMAAKGNAPVPI
DAVEIVDEERLSTGIGEFDRVLGGGLVAGTLILIGGDPGIGKSTLMLQALHGIARAGHKV
LYVSGEESVRQLRLRSHRLGTASPTLLVVSEIDIDAVMTMVVNETPDVLVVDSIQTMFSP
EITSAPGSVSQVRESTMQLMLMAKRTGIPTFLVGHVTKEGAIAGPRLLEHMVDTVLYFEG
DRNHVFRILRAVKNRFGSTNEIGVFEMKAQGLCEVANPSAVFLSERPENAAGSVVTASIE
GTRPILVELQALASSTNLGTPRRTILGLDPNRVALLVAVMEKQLGMHLMGHDIFMNVAGG
VKIMEPAVDLGIVAAIASSFLDRPIHKDTLAIGEVGLAGEVRAVGNLETRIMEAQKMGFS
RCVVPKGSLKRLPRTQGIQLEGVDTVGDAMELLF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaaaagcataaaaaccctgtttgtctgccaggcttgcgggtatgaatcagcc
aaatggctgggtcgctgcacggaatgcggcggctgggatacctttgtcgaagcggtgaaa
aagcccaagacatccggcgttcggtccatggccgccaagggcaatgccccggttcccatc
gatgccgtggaaatcgtcgatgaagagcggctgtccacgggaatcggcgagtttgaccgt
gtgctgggaggcggtctggtggccggcaccctgatattgatcggtggtgatccggggatc
ggcaaatccacactgatgctccaggccctgcacggcatcgccagggccggccataaggtt
ctgtacgtgtccggagaagagtcggtgcgtcagctgcgccttcgtagccaccggctgggc
acggcctcccccaccctgttggtggtgtcggaaatcgatatcgatgcggtgatgaccatg
gtggtaaatgaaacccccgacgtcctggtggtggattccattcagaccatgttcagcccg
gaaatcacctctgccccgggtagtgtcagccaggtacgcgaatccaccatgcagctgatg
ctgatggccaaacgtaccggcatccccacgttcctggtcggccacgtaaccaaagagggc
gccattgccggcccgcggctgctggaacatatggtcgatacagtgctgtatttcgagggg
gatcgcaatcatgtattccgaatcctgcgcgccgtgaaaaaccgtttcggctccaccaac
gaaatcggcgtatttgaaatgaaagcccaggggctgtgtgaggtggccaatccatcggct
gtatttttgtccgaacgcccggagaatgccgccggatcggtggtcacggccagtatcgaa
ggcacccggccgattctggtagaactccaggccctggcttccagcaccaacctgggcaca
ccacggcgcaccatcttagggctcgaccccaaccgcgtggcgctcttggtggcggtgatg
gaaaagcagctgggcatgcacctgatgggccatgatattttcatgaacgtggccggtgga
gtgaaaattatggaaccggccgtagatcttggcattgtagcggccattgcctccagtttt
ctggatcgccccattcacaaagacacccttgccatcggtgaggtgggcctggccggcgaa
gtacgggccgtggggaatctggaaacccgtatcatggaagcccaaaaaatgggcttcagc
cgctgcgtggtccccaagggcagcttgaaacggcttccccggacccaagggattcagctg
gagggggtggatacggtcggcgatgcgatggagctgttgttctga
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