Desulfosarcina variabilis: Dvar_71000
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Entry
Dvar_71000 CDS
T10869
Name
(GenBank) RpsA: ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
dvr Desulfosarcina variabilis
Pathway
dvr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Dvar_71000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dvr03011
]
Dvar_71000
Ribosome [BR:
dvr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Dvar_71000
Bacteria
Dvar_71000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
PCB_OB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
XPS89081
LinkDB
All DBs
Position
complement(7940947..7942422)
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AA seq
491 aa
AA seq
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MNEDEFEKDGVEKEPSEDEESFAELFESYSAGMNENINVGDSIRGRIISIGSTNVFVDTG
TKVDGVVERSELLDENGELPFDVGDELDLYVVAADESEIRLSKAISGIGGLNMLRDAWQQ
RIPVEGKVVASIKGGFHVEVVKRRAFCPISQMDVIYVEDPATYVGQTLTFIIKRFEENGR
NIVVSRREILQKELDASRKAFMAEMTEDAVYAGKVVRLVPFGAFVSLAPGVEGLVHISEL
SWSRLDTPEQVVKVGDQLQVKVLGIKAGEKPGSQKISLSVKQAMGDPWADVLQHVQVGQK
RMGKVTRCANFGAFVELSPGIEGLVHISEMSYTRRVMRPEEVVAPGDEIMVMVKEVDPDR
KRISLSIKDAEGDPWADVEEKFKPGKTVKGQVEKKEGFGIFVNLAPGITGLLPKSKIAAS
EKASEIESAKPGAIINVTIDQINVAERKISLGTGDVADDQSWQDYSGGGSDSLGSLGDQL
KKALSQKKNGG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggacgagtttgaaaaggatggggttgaaaaagaaccttccgaggatgaagaa
agttttgccgagctgtttgaatcgtacagcgccggcatgaacgaaaatatcaatgtcggc
gatagcatccgcgggcgaattatttccatcggcagcacgaatgtgtttgtggataccggc
accaaagtggatggtgtggtggagcgcagcgaactgcttgatgaaaacggcgagcttcca
tttgatgttggcgatgagctggatctgtatgtggttgccgccgatgagagcgaaattcgg
ctgtcaaaggcgatttccggtatcggcgggttgaacatgctaagggatgcctggcagcag
cgcattccggttgaaggcaaggtcgttgcctccatcaagggtgggtttcatgtggaggtg
gtcaagcggcgggccttttgtccaatcagccagatggacgtgatttatgttgaagatccc
gccacctatgtgggtcagaccttgacgtttataatcaagcggtttgaagaaaacgggcgc
aacatcgtggtatcgcggcgtgaaatcctgcaaaaagaattggatgccagccgcaaggca
ttcatggccgagatgaccgaggatgccgtctatgcgggcaaggtggttcgcctggttcct
tttggggcctttgtctccctggcaccgggtgtggaaggtctggttcatatcagtgaatta
agctggtcccgcctggacaccccggagcaggtggtaaaagtgggcgaccagttgcaggtg
aaggtgctgggtatcaaagcaggcgaaaaacccggttcccaaaaaatttctctgtccgtc
aaacaggccatgggcgatccctgggccgatgtgttgcagcacgtccaggtgggacaaaaa
cgcatgggcaaggtgacgcgttgtgccaattttggtgcgtttgtcgaactttctcccggc
attgaagggttggtgcacatcagtgaaatgagttacactagacgggtaatgcgacctgaa
gaagtcgttgcccccggtgacgagatcatggtcatggtcaaagaggtggatccggatcga
aaacgcatttcgctgagtatcaaagatgccgaaggcgacccctgggccgatgttgaagaa
aaattcaagcctggaaagaccgtcaagggacaggtggaaaaaaaggaaggctttggtatt
tttgtcaacctggcacccggcatcaccgggttgcttcccaaatccaaaatcgccgcctcg
gaaaaggcgtccgaaattgaatccgccaagcccggcgcaatcatcaatgtgaccattgat
cagatcaacgtcgccgaacgaaaaatatccctgggcaccggagatgtcgccgacgatcaa
agctggcaggactattccggcggcgggtctgattcattggggtcactgggcgaccaattg
aaaaaagcactatcccagaaaaaaaatggaggctga
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