KEGG   Desulfosarcina variabilis: Dvar_72410
Entry
Dvar_72410        CDS       T10869                                 
Name
(GenBank) type III secretion system inner membrane channel protein, YscV
  KO
K03230  type III secretion protein V
Organism
dvr  Desulfosarcina variabilis
Pathway
dvr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dvr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dvar_72410
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dvr02044]
    Dvar_72410
Secretion system [BR:dvr02044]
 Type III secretion system
  Type III secretion core apparatus
   Dvar_72410
SSDB
Motif
Pfam: FHIPEP DUF5645 DUF8042 Ig_TRS130_1st
Other DBs
NCBI-ProteinID: XPS89222
LinkDB
Position
complement(8109109..8111199)
AA seq 696 aa
MLLNNAKTFVIYITRHNDILLAVLVVAIISLIVLPLPTALMDTFISINLGVSISLLMLST
YIPNSTALSTFPTLLLLATLFRLSLNIASTRLILLDADAGKIIDTFGNFVVAGNFVVGAV
VFLIITIVQFLVIAKGTERVAEVAARFTLDAMPGKQMSIDADLRAGIIDITEAKNRRTLI
QMESSLYGAMDGAMKFVKGDAIAGLIVTVINILAGICIGIFQKGMQINKAVETYSVLTVG
DGLIAQIPALLISIAAGIIITRSNDNKIPNLGSEIGFQVLSQPKSILISGIILCSFSVIP
GFPAFQFMIIGGLILTIGLIFHISFKSPSNNQIDINEYLLSHISKDIYTKKDKEDTLLVT
IPLQIDMDMEIQKFLNPISFNSKLIQVRRALYQDIGILFPKINLNITESGKNGQYTILVN
EIPVSHGYIIPGHYLVMESETTLSILGIETKYEKPFISDKTSIWVPKDYKRQLEIANIKH
MGPSEILTYHLAVVLKDNASEFIGLQETKYLIKKTEEKYPDLVQEMNKILNVSQITNVLK
RLVEEEVSIRNLKLIFHHLIEWGQKEKDIILLTEYIRVELKRYISHRYSAGKNMIAVYMF
DRQIEEEIRNSIRKSSGTNYLVLGPDKRKKILDAIKKEIGTNNGNATNPVLLTSMDIRRY
VKKFIEQEIKNLSVLSYQEISQDVLVQPLGRIQLTS
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgttactaaacaacgcaaaaacgtttgttatctacattactcgtcataatgatatcctt
ttggcagtgcttgttgttgctataatttctcttatcgttttaccccttccaacagcttta
atggatacctttatttctataaatctcggcgtctcaattagtttattgatgttatctaca
tatataccaaactcgactgctctatcaacttttccaactcttttgcttttggcaacactt
ttcagactctccttaaatattgccagcacacggctgattctgcttgatgcagatgctgga
aaaataattgatacttttggcaattttgttgtagcaggcaattttgtcgtcggcgcagtt
gtatttttaatcatcacaattgttcaatttctggtaattgccaagggaactgaaagagtt
gccgaagttgcagcaaggttcacgctggatgcaatgcctggaaaacagatgagtattgat
gccgatttgagagctggaataatcgatatcacagaggctaaaaatagacgaacattgatc
cagatggaaagctctctttatggcgccatggacggtgccatgaagtttgtcaaaggagat
gccattgctgggttgattgtaactgttatcaatattttggctggaatatgtattggcata
tttcaaaaaggaatgcaaataaataaagccgtagaaacgtattctgtgttaactgttggt
gatgggttgatagcacagataccggctttgttaatttcaattgccgctggaataataatt
acacgtagtaatgataataaaattcctaatttgggaagtgaaatcggttttcaggtttta
tctcaaccaaaaagcatattaatcagtggaattattctatgctcattttcagtgatacca
ggctttccagcatttcaatttatgattataggtgggctgattttgacaattggtctaata
ttccatattagttttaaaagcccctccaataatcaaattgatatcaatgaatacttatta
tctcacatttcaaaagatatatatacaaaaaaagataaagaagatactttattagtaacc
ataccattacaaattgacatggatatggaaattcaaaagtttctaaatccaattagcttc
aatagtaaattaatacaggttagaagagcgctatatcaagatattggaatcctttttcct
aaaataaatctaaacatcactgaatcaggtaaaaatggacaatatacaattttggttaat
gaaattcctgtctcccatggttacataatccctggacattatttggtgatggagtccgaa
actacgctatcaatactgggtatagaaacgaaatacgaaaaaccatttatatcagacaag
acatctatttgggtgcccaaagattacaagcgtcaacttgaaatagctaatattaaacat
atggggccatctgaaatattaacctatcaccttgcggttgttttaaaggataatgcttca
gaattcataggtttacaagaaacaaaatatttaataaaaaagaccgaagaaaaataccct
gatctagttcaggaaatgaataagatattaaatgtatcccaaataacaaatgttttaaaa
agattggtagaagaggaagtttcaataagaaatttgaaacttatatttcatcatctaatt
gaatggggacaaaaagaaaaagacattatcctgcttacggaatatataagggttgaactt
aaacggtatataagtcatcgatacagtgccggaaaaaatatgattgcggtttacatgttt
gataggcagatagaagaagagatacggaattccatacgaaaaagctcgggtacaaattat
ttggttcttggtccagataaaagaaaaaaaatattggatgcaattaaaaaagaaattggt
acaaataatggtaatgcaacaaatccggttctgctaacttcgatggatattcgaaggtat
gtaaaaaaatttattgagcaagaaattaaaaatttatcagttctttcatatcaggaaata
tctcaagatgttttggtccagccgttgggccgtatacaacttacgtcataa

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