Desulfosarcina variabilis: Dvar_76000
Help
Entry
Dvar_76000 CDS
T10869
Name
(GenBank) FadD9: long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00061
Fatty acid biosynthesis
dvr00071
Fatty acid degradation
dvr01100
Metabolic pathways
dvr01212
Fatty acid metabolism
dvr02024
Quorum sensing
dvr04146
Peroxisome
Module
dvr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dvar_76000
00071 Fatty acid degradation
Dvar_76000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dvar_76000
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dvar_76000
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dvr01004
]
Dvar_76000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvr04147
]
Dvar_76000
Enzymes [BR:
dvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dvar_76000
Lipid biosynthesis proteins [BR:
dvr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dvar_76000
Exosome [BR:
dvr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dvar_76000
Exosomal proteins of breast cancer cells
Dvar_76000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XPS89581
LinkDB
All DBs
Position
complement(8520715..8522646)
Genome browser
AA seq
643 aa
AA seq
DB search
MHKSADGGIEITRELTIQKLFVHQARHYGASRVAMREKEFGLWRPITWQDYLENVKYLSL
GLVQLGLAPGDKVAMIGDNRPEGLWAEMATLCAGGVAVWLFQDCLIDEVKYIIDHSDTKF
LFGEGQEEVDKAISIIGECPKLEKVIWDDPKGMRNYHQDYLNSFKDVMALGRELEKAQPD
LFDEMIGRGHGDDVALLFYTSGTTSLPKGALLSHNNMLTMGQHLMAVDPCYDTDDYVSYL
PFAWIGEQMMSISCGLQIGYTINFPEEPETAQENIREIGPHVMFAPPRMYEQMTRSVQVK
HLDASWIKRQFFSLSSKIGYRVANLKFKKQPVPIVWKILEWLAYVTVQKKLKDHLGLTRV
RHAYTGGAAMGPDHFRFFHALGVNLKQIYGQTEVAGISVVHRDGDIKFDTVGHPIPGTEI
KITEDGEIITRSSSVFLGYYKNPEATEEALVDGWLHSDDKGFLDDDGHLVVFDRTKDVFT
LRDGKPFSPQYLETRLKFSPYIRDSWVIGDKKDYITAVLCIDYNVVGKWADEKKLNYTSY
QELSQKPEVYDLVEKQIRQANQDLPDAAKVAKFTNLYKEFDADDDELTRTRKLRRAFVQK
RYRVIVDALYTDADSVHIDTTIKYEDGREAHIKTDMRIIHLTD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgcataagtcggcggacggcggtatcgagattaccagggaactgaccatccagaagttg
tttgtccatcaggcccggcattacggcgccagccgggtggccatgcgggaaaaagaattc
gggctgtggcggcccatcacctggcaggactatctcgagaatgtgaaatatctcagcctg
gggctggttcagttgggactggcgccaggcgacaaggttgccatgatcggcgacaaccgg
cccgagggcctgtgggccgaaatggccaccttgtgcgccggcggtgtggccgtatggctg
ttccaggattgcctgatcgatgaggtcaaatacatcatcgatcattcggacaccaagttt
cttttcggagagggccaggaagaggtcgataaagcgatttccatcatcggggagtgtccc
aagctggagaaggtcatttgggacgaccccaagggcatgcgcaactatcaccaggactac
ctgaacagtttcaaggatgtgatggccctgggccgggagcttgaaaaagcgcagcccgat
cttttcgacgaaatgatcggtcgcgggcacggtgatgatgtggcccttttgttctatacc
tcgggaaccacctcgctgcccaagggcgcgctgctttcccacaacaacatgctcaccatg
ggccagcacctgatggccgtggacccctgttacgacacggacgactatgtctcttatctg
ccttttgcctggatcggcgagcagatgatgtctatttcctgcggcctccagatcggatac
acgatcaactttcctgaagagccggaaaccgcccaggagaacatccgtgagatcggtccc
cacgtcatgttcgctccgccgcgcatgtacgagcagatgacccgctcggttcaggtcaag
catctggacgccagctggatcaaacgccagtttttcagcctgtcgtcgaaaatcggctat
cgtgtggccaacctgaaattcaagaaacagccggtgcccatcgtctggaagatcctcgaa
tggctggcctacgtgaccgtccagaaaaaactcaaggatcacctgggacttacccgggtt
cggcatgcgtacaccggtggtgcagccatggggcccgaccatttccgtttttttcatgcc
ctgggggtcaacctcaaacagatctacggccagaccgaggtggccgggatcagcgtggtc
catcgcgatggggacatcaaattcgacaccgtggggcatcccattcccggcaccgagatc
aaaattaccgaggatggcgaaatcattacccgcagttcgtccgtattcctcggctactac
aaaaaccccgaagccacggaagaggccctggtggatggctggctccactccgatgacaag
gggtttctcgacgatgacggccatctggtggtcttcgaccggaccaaggatgtcttcacc
ctgagggatggaaaaccgttttctccccaatacctggaaacgcgcctcaagttcagcccc
tatatccgggattcctgggtgatcggggacaagaaggactacatcacggcggtactgtgc
atcgattacaatgtggtcggcaaatgggccgatgagaaaaagctcaactacaccagctat
caggagctttcccagaaaccggaggtctacgatctggtcgaaaagcagatccgccaggcc
aaccaggatcttcccgatgcggccaaggtggccaaatttaccaatctttacaaggaattc
gatgcggatgacgacgagctgacccgcacgcgcaaactgcgccgggcgtttgtacaaaaa
cgctatcgcgtgatcgtggatgcactctataccgatgccgacagcgtgcacatcgatacg
accattaaatatgaggatggtcgcgaagcgcacatcaaaaccgatatgcgcatcattcat
ctgacggattga
DBGET
integrated database retrieval system
