Desulfosarcina variabilis: Dvar_77420
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Entry
Dvar_77420 CDS
T10869
Name
(GenBank) GlgB: predicted 1,4-alpha-glucan-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00500
Starch and sucrose metabolism
dvr01100
Metabolic pathways
dvr01110
Biosynthesis of secondary metabolites
Module
dvr_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Dvar_77420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvr04147
]
Dvar_77420
Enzymes [BR:
dvr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Dvar_77420
Exosome [BR:
dvr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Dvar_77420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
CBM_48
GlgB_N
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
XPS89723
LinkDB
All DBs
Position
complement(8684885..8686903)
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AA seq
672 aa
AA seq
DB search
MTDITTMVDHLIAADPYLKSHREDLTRRLDHIRHMHERLTEGRVDLLDLASGHEHFGLHR
TGKGWTFREWAPAATAIYLVGDFSGWKEDAAFALTRTGDSGQWAIDLPLGALHHQDLFRL
RIHWPGGAGDRIPAYARRVVQDPRTLIFNAQVWAPDTPYVWRCPDFRRSKRPPLIYEVHV
GMAQEAEKIGTWAEFTENVLPRIVRSGYNTIQLMAVQEHPYYGSFGYHVSNFFAASSRFG
PPEDLMALIDAAHAQGLAVIMDLVHSHAVSNTVEGLGAFDGTQYQYFHQGPRGRHHAWDS
RCFDYGKPEVVHFLLSNCRYWLDAFHVDGFRFDGITSMLYTHHGLERAFTGYDDYFNETV
DEDALAYLALANEVIHRLRPDAVTVAEDISGMPGLALPVESGGVGFDYRFAMGVPDHWIR
LTKDTPDENWPMGHLWYELTNRRQEEQTISYTESHDQALVGDKTLMFRMADAAMYRHMAL
DDPDLGVERAMALHKMIRLITLATAGSGYLNFMGNEFGHPEWIDFPREGNNWSYAYARRQ
WCLVDDPQLKYYLLARFDRQMIRLIDTAELLAKGAPSLLWEHDHDKIIAFLRAGWIFAFN
FHPTQSFAGYGIPAPAERFRMVLDTDDRQFGGHGRLVAGQVHHPHQAEDNPWGSQLQLYL
PCRTALVLKHAI
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatcactaccatggtcgaccacctgatcgcagcggatccctacctcaagagc
caccgtgaggatctgacccggcgcctcgaccatattcgccatatgcatgaacgtcttacc
gaaggtcgcgtggatttattggacctggcttcgggtcacgagcatttcggtttgcaccgg
accggcaagggatggacattcagggagtgggcaccggccgccacggccatctacctggtg
ggagatttctcgggctggaaggaagatgccgcttttgccctgacccggaccggcgatagc
ggtcaatgggccatcgatctgcctttgggggcattgcatcaccaggatctttttcgactg
cgcatccattggcccggcggtgcgggcgaccgcatcccggcctatgcccggcgggtggtc
caggacccccgaaccctgattttcaatgcccaggtgtgggccccggacacgccatacgtg
tggcgatgcccggatttccggcgatcaaagcgaccgcccctgatttatgaagttcacgtg
ggcatggcccaggaagccgagaagatcggcacgtgggctgagtttaccgagaatgtccta
ccgcgaatcgtccgctccggctataatacgattcaactcatggcagttcaggaacatcct
tattacggctcctttggctaccatgtatccaattttttcgccgcctcgtcgcgctttggc
ccacccgaggacctcatggcgctgatcgatgcggctcatgcacaggggctggccgtgatc
atggatctggtgcattcccatgccgtgtccaacacggttgaggggctgggggctttcgac
ggaacacaataccagtatttccatcaaggtccgcgtggccgccatcatgcctgggacagc
cgctgttttgattatggtaaaccggaagtggttcattttctgctctccaattgccgctat
tggctggatgcctttcatgtggacggattccggtttgacggcatcaccagcatgctctac
acccaccatggtctggaacgggcttttaccggctatgacgattacttcaacgaaaccgtg
gatgaggatgccctggcatacttggccctggccaacgaggtcatccatcgtctgcggccc
gatgccgtgaccgtggccgaagacatcagcggcatgccgggactggcccttccggtcgaa
tcgggcggggtggggtttgactaccgttttgccatgggggtgcctgaccactggattcgg
ctgaccaaggacacgcccgacgagaactggcccatggggcacctgtggtacgagttgacc
aaccgacggcaggaagagcaaaccatcagctacaccgaatcccacgaccaggccctggtg
ggagacaaaaccctgatgttccgtatggccgatgccgccatgtaccggcacatggccctc
gatgatccggatctgggggttgaacgggccatggcgctgcataaaatgatccggttgatt
acgctggccacggcgggcagtggctacctcaattttatgggcaatgagttcggccatccc
gagtggatcgattttccccgggagggtaacaactggagctatgcctatgcccggcgtcag
tggtgtctggtggatgatccgcagctgaaatattatctgctggcccgttttgatcggcag
atgattcgtttgatcgacaccgctgaactgctggccaagggtgcgccatctctattgtgg
gagcatgatcacgacaaaatcattgcctttttgcgcgccggatggatttttgcgtttaac
ttccatcccacccaatcctttgccggctatggcattcccgccccggcggagcgctttcgc
atggtgctggatacggatgatcgccagtttggcggccatggccggttggtggccggacag
gtgcatcacccccatcaggccgaggacaatccctggggcagccaacttcagctttatctg
ccgtgtcgcacggcattggtcttgaaacatgcaatctaa
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