Desulfosarcina variabilis: Dvar_79110
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Entry
Dvar_79110 CDS
T10869
Name
(GenBank) NifA:Nif-specific transcriptional regulator NifA
KO
K02584
Nif-specific regulatory protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dvar_79110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvr03000
]
Dvar_79110
Transcription factors [BR:
dvr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dvar_79110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_16
AAA_22
SMC_Nse1
bpMoxR
AAA_19
AAA_3
BrxC_BrxD
AAA_7
AAA_30
ABC_tran
ATPase
Motif
Other DBs
NCBI-ProteinID:
XPS89892
LinkDB
All DBs
Position
complement(8884234..8885805)
Genome browser
AA seq
523 aa
AA seq
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MENNIFELELKTLYAISHKTGQVLDLDHTLMAILEILSKNLSMERGTVTLKDRHTGLLKI
IASHGLDPMEQKRGIYHPGEGVTGAIFETAQPFAVPDIGKEPLFLNRTQARSLTKNSLAF
IGVPILLNNDPIGVLSVDRLFGPEVDFKEDIRFLTIVATLMAQFVQLNRQVERREEHLLT
ENRSLRAEVSAKYNHFFAVGVSPAMQTLNKMIRKVAPSRASVLLLGESGTGKTLTARIIH
ELSQRRRNPFAKVNCAALPDNLIESELFGHEKGAFTGATQLKKGRLEEADSGTIFLDEIG
ELPLPVQAKLLRFLQEREFERLGSTQTRKVDVRIIAATNIDLNQAVEDGRFRSDLFYRLN
VFPISIPPLRQRKADLPLLVDYFISKIAREYGRQFYFSTECMEIMAAYNWPGNVRELENL
IERVAIMAESNQIQPRMLPAYLFSNKKTSNLEAPDTTTTSRLEMMERETVLEALARNDWV
QQKAAREIGLTLRQMGYRVKKFKLDKIIRENKLNNNQYKNLSN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaatattttcgaattagagctgaaaacgctttacgcaatcagccacaaaaca
ggccaggtcttggatctggaccatacgttgatggcgattcttgaaattctatccaagaat
ctgtccatggaacggggcacggtgacgctcaaagacaggcatacgggtttactcaaaatc
attgcctcccacggcctggatcccatggagcagaagcggggaatctatcatcctggagaa
ggggtcaccggggccatctttgaaacggcccaaccctttgcggtgccggatatcggcaag
gaaccgctttttctcaaccgaacccaggcccgtagtcttaccaaaaacagcctggcattc
atcggcgtgccgatcttgctcaataacgaccccattggcgtgctcagtgtagatcggctt
tttgggccggaagtggacttcaaggaagatatccgattcctcactattgtggcgacattg
atggctcagtttgttcaactgaaccgacaggtcgaacgacgcgaggagcacctgctgacc
gaaaaccgcagcctgcgggctgaagtgtcggccaagtataatcattttttcgcggttggc
gtcagcccggccatgcaaacgctgaacaagatgatccgtaaggttgctcccagccgggcc
tcggtattgcttctcggtgaatcggggaccgggaaaacactcaccgcgagaattattcac
gaactcagccaacgccgcagaaatccgtttgccaaggtcaattgtgccgccctgccggat
aacctgatcgagtccgagttgttcggccatgaaaagggcgcctttacaggcgccacccag
ttaaaaaaagggcgcctggaagaagcggacagtggaaccatctttttggacgagatcggt
gaattgccgcttccggtgcaggccaaactgctgcgatttttgcaggaacgtgaatttgaa
cgcttgggcagcacgcagacccgcaaggtcgatgtgcgcatcattgcggcaaccaacatt
gatttaaaccaggccgtggaagacgggcgcttcagatcggacctgttttaccgtctgaat
gtttttccgatttcaattcccccgcttcgtcagcgcaaagccgatcttcccctgttggtc
gattattttatttccaaaattgctcgggagtacggtcggcagttttacttctccaccgaa
tgtatggaaatcatggctgcctataactggcccggtaatgtgcgcgaattggaaaatctt
atcgagcgggtagccatcatggccgaaagtaatcagatacaaccccgtatgcttcccgcc
tatctttttagcaataagaaaacatccaatcttgaagcgccagatacaactacaacatcc
cgtcttgagatgatggaaagagaaaccgttctggaagcactggcgcgaaatgattgggtg
cagcaaaaagcggcccgagaaatcggtcttacgctgaggcagatgggctatcgggtaaag
aagtttaagctcgataaaatcatccgcgaaaacaaactgaacaacaatcagtacaaaaat
ctctccaattga
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