Desulfosarcina variabilis: Dvar_80840
Help
Entry
Dvar_80840 CDS
T10869
Name
(GenBank) LysA: diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00300
Lysine biosynthesis
dvr00470
D-Amino acid metabolism
dvr01100
Metabolic pathways
dvr01110
Biosynthesis of secondary metabolites
dvr01120
Microbial metabolism in diverse environments
dvr01230
Biosynthesis of amino acids
Module
dvr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dvar_80840
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dvar_80840
Enzymes [BR:
dvr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dvar_80840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XPS90065
LinkDB
All DBs
Position
complement(9081704..9082942)
Genome browser
AA seq
412 aa
AA seq
DB search
MNYFECRNGELWAEDVRVSELAEKYGTPLYIYSTKTLKRHYRAFDKALTGVDHLTCFSVK
ANSNVGLLRLLGGYGAGMDIVSGGELYRALAAGVDPQKIVFSGVGKQDHEIKEALDADIL
MFNVESTQELERIGAIAGQMNTVARVSIRINPDVDPKTHPYISTGLKKNKFGLDMLEATG
VYSMAKHHPALDPVGLDCHIGSQLTQISPFAEALEKLLDFADQLKSSGIDIRYLDLGGGL
GITYNEESPPLPEDLGRAIMDTLAGRQLTVILEPGRAIAGNAGILVTRVIYTKKTPAKHF
VIVDAGMNDLVRPSLYQAFHRIGEVIPKGREKLSMDVVGPICESGDFLAQDRMLPTVQPG
ELLAVFSAGAYGFTMSSQYNSRLRAAEVIVDGDKTILARRRETYQDLIALET
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaactatttcgaatgccgcaacggtgagctttgggcagaagacgtccgtgtcagtgaa
ctggccgaaaagtatggcacgccactgtacatctattccacaaaaacccttaaacgtcat
tatcgggcctttgacaaagcattgaccggagtggaccatctgacctgcttttcggtcaag
gccaacagcaatgtcggcctgctgcggttgttgggaggctatggcgccggcatggatatt
gtatccggtggcgagctgtaccgggccctggccgctggggttgatccccaaaaaattgtt
ttttccggtgtgggcaagcaggatcacgaaatcaaggaagcgttagatgccgatattctc
atgttcaatgtggaatccactcaggaactggagcgcatcggtgccattgccgggcagatg
aataccgtggcgcgtgtcagcattcgcatcaatccggacgtggaccccaaaacccacccg
tatatttcaaccggactcaagaaaaacaagttcggtctggacatgctggaagccaccggc
gtctattcgatggccaagcaccacccggccctggacccggtggggctggattgccacatc
ggctcccagcttacccagatctcgccttttgcagaggccctggaaaagctgcttgatttt
gccgatcagttgaagtcgtcgggcattgatatccgctacctggatctgggcggggggctg
ggaatcacctataacgaagaatccccgccgctgcccgaggatctgggacgggccattatg
gataccctggccggccgacagctaacggtgattctcgagcccgggcgtgccattgccggc
aatgccggtattttggtcacaagggtcatctacaccaaaaagacgccggccaaacatttt
gtgattgtggatgcggggatgaacgatctggtacgcccctccctgtaccaggcgtttcat
cgcatcggtgaagtcattcccaagggacgcgaaaaactgagcatggacgtggtgggaccg
atctgtgaaagcggcgattttctggcccaggaccgcatgttgcctaccgtacagcccgga
gaactgttggctgttttttccgccggagcgtatgggttcaccatgtcgtcccagtacaat
tcccggctgcgggctgccgaggtgatcgtggatggcgataagaccattctggcgcgtcgg
cgtgaaacgtaccaggacctgatcgcccttgaaacttga
DBGET
integrated database retrieval system
