Desulfosarcina variabilis: Dvar_81750
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Entry
Dvar_81750 CDS
T10869
Name
(GenBank) RimO: ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvr03009
]
Dvar_81750
Enzymes [BR:
dvr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dvar_81750
Ribosome biogenesis [BR:
dvr03009
]
Prokaryotic type
ribosomal protein modification factors
Dvar_81750
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
XPS90156
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All DBs
Position
9197876..9199201
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AA seq
441 aa
AA seq
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MQIYIESLGCARNQVDSETMAGQLRLAGWHLTEDPAEAEVIVVNTCSFVESAINESIDTI
LELARFKEDGHCRQLIVAGCLPERFRDAIADSLPEVDQFLGTGAFGRIVDAVEDTLPRGA
CLLPDPDLIPIHSAATRQRQQTHTAYLKIAEGCSRHCTYCIIPRLRGQQKSRPMHLIIEE
ARQLIEAGVKEINLVAQDTTGYGHDLAEPATLADLLERLAGLEEQTWIRFLYGHPESITD
GVIDTVAAHPNLCAYFDLPVQHAAESVLKKMGRHYDSKQLLDLFARIRSRVPGAAIRTTL
IVGFPGETDADFKQLMDFVETVRFDHLGVFVYSDAEDLPSHALPGHVSKQTAQQRHDAIM
ARQLDISEDNLAALCGNALPVLIEHSPEPGLYEGRTMLQAPEVDGLTYVRQPPGAPELAI
GQIVPVTIVETLEYDLIGEAK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatatacatagaaagtttaggctgtgcacgcaaccaggtggacagtgaaaccatg
gctggacagttgcgcctggccggatggcacctgaccgaggatccggccgaggccgaggtg
atcgtggtcaacacctgcagtttcgtggaatcggccattaacgaatccatcgacacgatc
ctcgaactggcccgtttcaaagaagacggacactgccggcagctgatcgtggccggatgc
ctgccggaacgcttccgcgatgccattgccgattcccttcccgaagtggatcaattcctg
ggcaccggcgcctttggccgtatcgtcgacgctgtggaggatacgcttccccgtggggcc
tgtcttttgcccgatccagatctgattcccatccattctgccgcaacccgccagcggcag
cagacccacaccgcatacctgaaaatcgccgagggatgcagccgccattgtacctactgc
atcattccccggttgcgcggccagcaaaaaagccgccccatgcacctgatcatcgaagaa
gcccggcagttgatagaggccggggtcaaggaaatcaacctggtggcccaggacaccacc
gggtacggccatgacctggccgagccggcaaccctggccgacctgctggaacgtctggcc
ggcctggaagagcaaacctggatccgctttttgtacggccacccggagagcatcaccgat
ggcgtgatcgatacggttgccgcccatcccaacctttgcgcatatttcgatctgccggtt
cagcatgcggccgaaagcgtactgaaaaagatgggccgccactatgacagcaaacaactg
cttgatctgttcgcacgcatccgctcacgggtgcccggggccgctatccggaccaccctg
atcgtgggctttcccggtgaaaccgatgcggacttcaaacaactgatggattttgtcgag
acggtgcgtttcgaccacttgggcgtattcgtctattccgatgccgaggatctgccctcg
cacgcgctgcccgggcatgtatccaaacagacggcccaacagcgccatgatgccatcatg
gcccggcagctggatatttcggaggataatctggccgccctttgcggcaatgcactgccg
gtcctgattgaacactcgcccgaacccggcctgtatgaaggacggacgatgttgcaggcg
cccgaggtggacgggctgacctatgttcgccagcctcccggcgcccctgagctggccatt
ggacaaattgtgccggtaaccattgtggagacactggaatacgacctgatcggagaggca
aaatga
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