Desulfosarcina variabilis: Dvar_85620
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Entry
Dvar_85620 CDS
T10869
Name
(GenBank) beta-lactamase domain protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvr03016
]
Dvar_85620
Enzymes [BR:
dvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Dvar_85620
Transfer RNA biogenesis [BR:
dvr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Dvar_85620
Prokaryotic type
Dvar_85620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
CLP1_P
Lactamase_B
DUF87
AAA_25
AAA_7
AAA_16
CbiA
AAA_29
MeaB
AAA_30
AAA_22
NACHT
PDEase_II
T2SSE
AAA_5
Sigma54_activat
AAA_23
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XPS90543
LinkDB
All DBs
Position
9618575..9620503
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AA seq
642 aa
AA seq
DB search
MSADQPEVIAKRLFDCRRRVLVFGETGTGKSTLVTGLSRCLEKRSMGHRILIADPGSPAF
GIPGAVCLGWFEKGRFRLVAAEAICSLNAGRFRLPLMQAVGRLAVAENEAVLLIDGPGLT
RGIAAAELLTGLITAAAVDTLLLLSRKEKPAPLAAECRAAGIEVVTVLSSCAARSPSSRQ
RRRFRTALWDAHVSTFAVQRISLGGRLLLGTPPAMDHHQQWQGRQIALVENQRTIAMGEV
VAVKTDHLVVKLLDMGTRSGALLVRDAGRNSDGELVTITPAGRPAPRPGIWSVGAVAGPS
IISPGIPIHLGPLSATLVNGIFGDPLLHLRLPHQKRSLLFDLGEGNRLPARIAHQVSDVF
ISHAHIDHISGFYWLLRARIGDLPVCKLYGTASLSRHIQGMIQGIVWDRIGDRGPRFEVV
EVDEDRIVRRHLHVGNDDKPSCQQKAAFQGILVDDPAFTIRAAVLDHGIPVLALAYEEKP
RCQVIEARLRQTGWAQGPWLGELKRQVAAGAHDAMIELPDGSSQPVSRLAADLIRMAPGR
KLVYATDVADSPANRHKLVDLARGADLFLCEATYAQAHQHLATVNGHLTARACGEIATAA
GVRCLVPFHLSRRYERHPEQVFTEVIKSCPGVRLIPPRSMTS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgatcaaccggaggtcatcgccaagcgcctgtttgattgcaggcggcgggtc
ctcgtatttggagaaaccggcaccggcaaatcaaccctggtcaccggtctgtcgcgctgc
ctggaaaagcgcagcatgggtcaccgcattctgattgccgatccaggctctccggcattc
ggcatccccggcgcggtttgcctgggctggtttgaaaagggacgattccggcttgtggcc
gccgaggctatctgcagcctgaacgccggccggttccgtctgccgctgatgcaggccgtc
ggacgcctcgccgtggccgaaaacgaggcggtcctgttgatcgatggccccggcctgacc
cgtggtatcgccgccgcggaactgttgaccggcttgatcaccgcagcggctgtggatacg
ctgcttttgctttcccgcaaagaaaaaccagctcccctggccgctgaatgcagggcggcc
ggtatcgaggttgtgacggtactatcatcctgcgctgcccgaagcccaagcagccggcag
cggcggcggttccggacggccttgtgggatgcccatgtatcgacctttgccgttcaacgg
atttcgctaggcggccgtctactgctgggtaccccaccggcaatggaccatcatcagcaa
tggcagggccggcagatcgccctggtggaaaaccagcgtactattgccatgggcgaagtg
gtggccgtgaaaaccgaccatttggtggtaaaattgctcgatatggggactcgatcaggg
gcgttgttggtccgtgatgccggacgcaacagtgatggcgaactggtcaccatcacgcct
gccggaaggccagcgccaagaccgggcatctggtctgtgggagctgtcgccggcccgtcg
atcatcagtcccggcattccgatccacttaggcccgcttagcgccaccctggtcaacggc
attttcggagacccgcttctccatcttcgccttcctcaccaaaaacgcagcctgctgttt
gatctgggcgagggcaaccgtctgccggcccgtattgcccaccaggtcagcgacgtcttc
atcagccatgcccacatcgaccatatcagtggcttttattggttgctgcgtgcccgcatc
ggcgatctcccagtctgtaaactctacgggacagcaagtctttcacgccacatccagggg
atgatccagggcattgtctgggaccgcatcggtgatcgcggcccccgcttcgaggttgtg
gaagtagatgaggaccgcatcgtgcggcgtcacctgcacgtcggaaatgatgataagcca
tcgtgccaacagaaggccgcatttcaaggtatcctggtcgatgatccggcgtttaccatc
cgcgccgccgtcctcgaccacggcatcccggtactggccctggcatacgaggaaaaaccc
cgctgccaggtgatcgaagccaggctgcgccaaaccggttgggcacaaggtccctggctg
ggcgagctcaaacggcaagtcgccgccggcgcacatgacgcgatgatcgagctcccggac
ggctccagccagcctgtttccaggctggccgcagacctgattcgcatggcgccgggccgc
aagctggtgtatgccacggatgtggcggattcacccgccaatcgacacaaactggtcgac
ctggcccgtggggcagacctttttctgtgtgaggccacctatgctcaagcccaccagcac
ctggcaacagtcaacggccatttaacggcccgggcatgcggtgagattgccacggccgcc
ggtgtccggtgcctggttccttttcacctgtcccgccggtatgaacggcaccccgagcag
gtgttcactgaagtcatcaaatcctgcccaggggttcgcttgatcccccctcgatcgatg
acctcttaa
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