KEGG   Daktulosphaira vitifoliae (grape phylloxera): 126893670
Entry
126893670         CDS       T09738                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
dvt  Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03030  DNA replication
dvt03410  Base excision repair
dvt03420  Nucleotide excision repair
dvt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dvt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126893670
   03410 Base excision repair
    126893670
   03420 Nucleotide excision repair
    126893670
   03430 Mismatch repair
    126893670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dvt03032]
    126893670
   03036 Chromosome and associated proteins [BR:dvt03036]
    126893670
   03400 DNA repair and recombination proteins [BR:dvt03400]
    126893670
DNA replication proteins [BR:dvt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126893670
  DNA Replication Termination Factors
   ELG1-RFC complex
    126893670
Chromosome and associated proteins [BR:dvt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126893670
DNA repair and recombination proteins [BR:dvt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126893670
  Check point factors
   HRAD17(Rad24)-RFC complex
    126893670
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rad17 AAA_19 AAA_11 AAA_16 RuvB_N Mg_chelatase AAA_30 AAA_24 AAA_22 AAA_14 ResIII AAA_7 AAA_5 DUF815 SLFN-g3_helicase bpMoxR nSTAND3
Other DBs
NCBI-GeneID: 126893670
NCBI-ProteinID: XP_050520039
LinkDB
Position
Unknown
AA seq 236 aa
MESFLKTGKLNQDLQTSNLLEKPKHGSKVLDSTTPWVEKYRPRTVDEVSEQSEIVAVLKQ
CLEEGADMPHLLFYGPPGTGKTSTIIAAARQLFGDMYKERMLELNASDDRGIQVIRDKVK
TFAQLTASDKRPDGKPCPPFKIIVLDEADSMTAPAQAALRRTIERETKTTRFCLICNYVS
CIIDPLTSRCSKFRFKPLSHDIMYPEATIILLPSFSVTLIIVKFALDRLSIRLALT
NT seq 711 nt   +upstreamnt  +downstreamnt
atggaatcattcttgaaaactggaaaacttaaccaagatttacagacttctaatttatta
gaaaaacccaaacatggatctaaagttcttgatagcactacaccttgggttgagaaatat
cgtccccgtacagtggatgaagtatctgaacaatctgaaattgtagctgtcttaaagcaa
tgtttagaagaaggagctgatatgcctcatctgttattttacgggccacctggtactggt
aaaactagtaccattatagctgctgctcgtcaattatttggagatatgtataaagaacgt
atgttagaattgaatgcttctgatgatagaggaattcaagtaattcgtgataaagttaaa
acttttgcccaactaactgcatctgacaaaagaccagatggtaaaccatgtccacctttt
aaaataattgtattagatgaagcagattctatgactgcaccagctcaggcagctctaagg
cgtactattgaaagagaaacaaaaactactagattttgcttgatttgcaattatgttagc
tgcataatagatccattaacatctcgttgttcaaaatttagatttaagccattgtcacat
gacattatgtatcctgaagctactataatacttttaccatcatttagtgttactctaata
atagtcaagtttgcacttgatagattaagtatcaggctggctttaacttaa

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