Daktulosphaira vitifoliae (grape phylloxera): 126893718
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Entry
126893718 CDS
T09738
Name
(RefSeq) eukaryotic initiation factor 4A-III-like isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03015
mRNA surveillance pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126893718
09122 Translation
03013 Nucleocytoplasmic transport
126893718
03015 mRNA surveillance pathway
126893718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126893718
03041 Spliceosome [BR:
dvt03041
]
126893718
03009 Ribosome biogenesis [BR:
dvt03009
]
126893718
03012 Translation factors [BR:
dvt03012
]
126893718
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126893718
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126893718
mRNA cycle factors
Stress granule specific factors
126893718
Spliceosome [BR:
dvt03041
]
Complex C
Other components
EJC/TREX
126893718
Ribosome biogenesis [BR:
dvt03009
]
Eukaryotic type
90S particles
Helicases
126893718
Translation factors [BR:
dvt03012
]
Eukaryotic type
Initiation factors
eIF-4
126893718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
126893718
NCBI-ProteinID:
XP_050520120
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MDTNKGKQNLEDQIKTLVMEKDLLKKQLNVLNECLSIEELKNKIEDLEMKMKTIALLENM
IKQLRQDVEPLNYLKSILKEKNLDKKNSECTSKNKSINETNEVLLKQPELFTLMNSLGES
DVLLNQNFNEKSTMIDTLNKIFEEPVDVPDENKSLDGSIHLLDQYDMLSEEDFLNVVPER
DSQVGNNSETIKGFELVNDTKHAKLLSNDITNFKSTEPVCSVNNNKNMINFDNCDLPLNE
ACLANSFLLKQNDEKEQSITKSLASDNNTNYNSTQKEQNSLNTLNLKFDILRGIYSSGYV
INPTTTQLKFIEHCVNGKDNILVVKPNLEWQIVILIPMLQRIIPVLRECQVLILVPTRDI
ALQIEQVMNKIGNFMDLEICIGGDNVPRKLPVVPLVVVGTPAGVSNMIACNSLNTEFIST
ILMYELDDMMPYYVVIEEIMNKLHVANKQITILASSGIDQILDMYIDSLQDPFIFLNDIK
EEPKISHGLPCQYVLGILDEYKFLTICQICEELKKESIIIFCNTLDVAQILCEQMLSLGF
LVSTYYSSMNNYECNKKLSLLVDHNIQIFITTDPIKKNEFPEFLPSYIVINYELPTDPLV
YISRLKFFKTNTKIINFISENDEIAKNSIEQYCVMLPMPINTKDILK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaataaaggtaaacaaaacttggaagatcaaataaaaactttggtaatggaa
aaagatttattgaaaaaacaattaaatgttctgaatgaatgtttatcaattgaagaattg
aaaaataaaattgaagatcttgaaatgaaaatgaaaactatagcattgctggaaaatatg
attaaacaacttagacaagatgttgaacctttaaactatttgaaatctatattaaaggaa
aaaaatttagataaaaagaattctgaatgtacatcaaagaataagtcaataaatgaaacc
aacgaagtattattaaagcaaccagaattatttaccttgatgaattctttaggagaatct
gatgttttacttaatcaaaattttaatgaaaaatcaactatgattgacactttgaataaa
atatttgaagaacctgttgatgtaccagatgaaaataaaagtttggatggcagtattcat
ctgttagatcaatatgatatgttgtcggaagaagattttttaaatgtggtgcctgagaga
gattctcaagttggaaataattcagaaacaattaaaggatttgaattagttaatgatact
aaacatgccaaattactcagtaatgacataactaattttaaatccactgaacctgtatgc
tcagtaaataataataaaaatatgataaattttgataactgtgatctacctttaaatgaa
gcatgtttagctaattctttcttattgaaacaaaatgacgaaaaagaacaatccattaca
aaatctttagcttctgataataacacaaattataattccacccaaaaggagcaaaattct
ttaaatactttaaatctaaagtttgatattttacgtggtatttattcatctggctatgta
ataaatccgactaccacacagttgaaattcattgaacactgtgttaatggaaaagataac
atactagttgttaaaccaaatttggaatggcaaatagtgattttaattcctatgcttcaa
cgaattatacctgtcttaagggaatgtcaagtactcattttagtgccaactcgtgatatt
gctctgcaaatagaacaggttatgaataaaattggaaattttatggatctagaaatttgt
attggaggagataatgtaccacgaaaactacctgtagttccacttgttgttgttggtaca
ccagctggtgtatctaatatgattgcttgtaattcattgaatacagaatttattagtaca
attctgatgtatgaattagatgacatgatgccttattacgttgtcattgaagaaataatg
aataagcttcatgtagcaaacaaacaaataacaatattagcttcgagtggaattgatcaa
attttagatatgtatattgattctttgcaagatccattcattttcttaaatgatataaaa
gaagaacctaaaatttctcatggattaccttgtcaatatgtattgggtatactagatgaa
tataaatttcttacaatttgtcaaatatgtgaagaattaaagaaagaatcaataatcatc
ttttgtaataccttagatgtagcacaaattttatgtgaacaaatgctatctttaggattt
ttagtttccacttattattctagcatgaataattatgaatgtaataaaaaattatctttg
ttagttgatcataacatacaaatttttataactactgatccaattaaaaaaaatgaattt
cctgaatttttacctagttatattgttataaactatgagttaccaacagatcctttagtg
tatattagtagactaaagttctttaaaactaatactaaaataataaattttatcagtgaa
aatgatgaaatagctaaaaatagtattgaacaatactgtgtaatgttacctatgcctatt
aatactaaagatatactaaagtga
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