Daktulosphaira vitifoliae (grape phylloxera): 126894272
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Entry
126894272 CDS
T09738
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126894272
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126894272
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126894272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
zf-C2H2_DHX34
DEAD
OB_NTP_bind
HA2_C
HA2_N
Rad17
nSTAND3
AAA_22
ResIII
AAA_19
AAA_7
AAA_14
AAA_23
Motif
Other DBs
NCBI-GeneID:
126894272
NCBI-ProteinID:
XP_050521112
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MYSEKRKSSDIDQHNYKHRKTSPKTFSFLNYKHTLDKVFFSNDLVEDVDDAWLFVKKFET
FVLKKLCIESSSTTTNKNPLNLPNTFDKMDMINLKLGISDEELTSRLPTYDQEKKYEKRP
LTKDDITQFRQLVEMYMDFKQKERFNKLVKLRDSQKSLPVHQFKNEIIDAVKNHRVVIIA
GDTGCGKSTQIPQYLSNAGYKCIACTQPRRIACISLSKRVAYESMSTFTNDVGYQIRFEK
TVNKNTKILFLTEGLLLRQVCGEDLLSQYDVIVLDEIHERHLHGDFLLGVMKCLLQQRSD
VKLVLMSATINVDLFNKYFSPLAKLIQVPGRLYPIKLEYHPIISEMKVLGKKSERFDPSP
FVKILQMIDKKYSKHERGDVLMFLSGMAEITAVADSARVYCEKADSWIILPLHSSMSLDE
QDKVFDYAPEGTRKCIISTNIAETSITIDGIRFVVDSGKVKEMSYDSASKVQRLKEFWVS
KASADQRKGRAGRTGPGVCYRLYSEDEFESMAEYSTPELQKVPLDSLLLQMVAMGLPNAR
LFPFIEPPQPESVENAIESLKQYGAITKEEKLTPIGNMLSRLPVDIPLGKMLIMGSLFDQ
LEPVLSLACVLSVQTPFTNKAYKDPECERARMDLESDHGDPIILLNAFKQWLELKSDGQN
INTRQWCKRRGFEEQRFYEMTKLRRQFKDLLDECGLVKNDEKNMDDMTSAERALRHGELK
LLRDMKKTHKEEESRKRKVLKKDVWEVEENVDTEDDTVDIRDIDFRLRHNQRQVKQLLKG
TTAISYKDLMMLKIILSSGLYPHIAIADEFNSCKTTKEHLFHTEGKPFVSLHPMSYFGNH
SEVLQLTELDVQHVPDFKSKSTISSKHQILIYMSLLETTKAYIMNSLRMPAIQTLLLFSR
NICTNKNFSQVVCDSWLLLEFPLSEAAETLIVRASKLRNTWERLLKLKLDEKSNRKAEKQ
LADDMVRFMYADVGYTIKRLLAADQKVLYLGPTGEDVQFSGCNPFSDVDWHVCEDDKFGG
LRLSPYLTYDCLTGQSQEVYEPWLCPFCENTIEIMSALERLQHKQVCHSQCISDSTQGDI
NDQTIKLKPNAKKYECDQCSEVLYLTPTDILKHKKSHLQ
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcgagaaaagaaaaagttcagatattgatcaacataattataaacatcggaaa
acgtcacctaaaacattttcgtttttgaattacaaacatacactagacaaagtatttttc
agcaatgaccttgttgaagacgttgatgatgcttggttatttgtgaagaaatttgaaaca
tttgttttgaaaaaattatgcatagaaagttcaagtactaccactaataaaaaccctcta
aatcttccaaatactttcgataaaatggatatgattaatttaaaattgggtatctctgat
gaagaattaactagtaggttacctacatatgaccaagaaaagaaatatgaaaagagacca
ttaacgaaagatgatatcactcagtttcgtcagttagtagaaatgtatatggattttaaa
caaaaagagaggtttaataaattggtaaaattaagagattctcaaaaaagtttgccagtt
catcagttcaaaaatgaaataatagatgctgttaagaatcatcgagttgtgataatagct
ggcgatacaggttgtgggaagtcaactcaaattcctcaatatttatcgaatgctggttat
aagtgtattgcttgcacgcaaccacgtagaatagcttgcatatcactttccaaaagagtt
gcttatgagtccatgtctacttttaccaatgatgttggctatcaaatacgatttgagaag
acagtaaataaaaacacaaaaattttatttttaactgaaggattattgctgagacaagta
tgtggagaagatttgctgtcgcaatatgatgttattgttttggacgaaatacatgaacgt
catttacatggcgatttcttgttaggagtgatgaagtgcttgttacaacaacgatctgat
gttaaacttgttcttatgtctgctaccattaatgtggatttatttaataaatatttttct
cctttggctaaactaatacaggttccgggtcgcttgtaccctataaaactagaatatcat
ccaattattagtgaaatgaaagttcttggtaaaaaatccgaacgttttgatccgtcacca
tttgtaaaaattctacagatgatcgataaaaaatattctaagcacgagagaggtgatgtg
ttaatgtttttgagtggtatggctgaaattacggctgtggcagattcagcacgggtgtac
tgtgaaaaagcagactcttggatcatcttacctttacatagttctatgtctttagatgaa
caagacaaagtttttgactatgcaccagaaggcacacggaagtgcattatatcaacaaat
attgccgagacttcaattacaattgatggcataagatttgtagtcgattccggtaaagtg
aaagagatgagctatgattcggcaagcaaagtacagagacttaaagagttttgggtaagc
aaagcaagtgccgaccaacgtaaaggaagagcaggtcgtactggccccggagtttgttac
cgtttgtattccgaggatgagtttgaatctatggctgaatatagtacacctgaattacaa
aaagtgcctttagactctcttttgcttcaaatggtagctatgggcttaccaaatgctcgt
ttatttccatttatcgaaccgccgcagccagaaagcgtggaaaatgctattgaatcatta
aaacaatatggtgctataacaaaagaagagaaactgactcctattggtaacatgttatct
cgattacctgtcgatatacctcttgggaaaatgcttattatggggtctctttttgatcag
ttagaacctgttttatctttagcttgtgtactatcagttcaaacaccttttacaaataaa
gcctataaagatcccgaatgcgagagagctagaatggatttggagtctgaccatggggat
ccaattattttattgaatgcgtttaaacaatggttagagttaaagagtgatggacaaaac
attaatacccgtcaatggtgtaaaagaagaggattcgaagaacagcgtttctatgaaatg
acaaagttgcgtcgacagttcaaagatctattagacgagtgtggtttggtaaaaaacgat
gaaaaaaatatggacgatatgactagtgctgaaagagctctaagacacggcgaattgaag
ttattgcgtgatatgaaaaaaacacataaagaagaagagtcaagaaagcgaaaagtatta
aaaaaagacgtttgggaagttgaagaaaatgtagatacggaagatgatactgttgatata
agagacattgattttcgacttagacataatcaacgtcaagttaagcaattattaaaagga
actacagcaattagttacaaagatttaatgatgttaaaaataattttaagtagtggttta
tatcctcatatagctatagctgacgaattcaattcttgtaagacaactaaagaacattta
tttcacactgaaggtaaaccgtttgtttcacttcatcctatgagctattttggtaatcat
tccgaagtactacagttgactgaattagatgtacaacatgttcctgattttaaaagcaaa
agtactatcagttcgaaacatcaaattttgatttacatgtctttgctagaaactactaaa
gcgtacattatgaattccttaagaatgcccgctatacagactcttttgttatttagcaga
aatatttgtaccaataagaatttttcccaagtagtttgtgattcctggttactattggag
tttccactgtcggaggcagctgaaacgttaatagttagagcatctaagctacgaaatact
tgggaaagactactcaaactgaaattagatgaaaagagtaatagaaaagccgaaaaacag
ttagcagatgatatggttcgattcatgtacgctgatgttggttatacgattaagcgttta
ttggctgcagaccaaaaagtcttatatcttggccctacaggcgaagacgtccaattttct
ggttgcaatcctttcagtgatgtggattggcatgtatgtgaagatgataaatttggtggt
cttcggttatcaccttatttgacttatgattgtttgacgggtcaaagtcaagaggtctac
gaaccatggctttgtcccttttgtgaaaatacaatagaaataatgagtgcactcgaaagg
ctgcaacataaacaagtttgccactctcaatgtattagtgactcaacacaaggtgatatt
aatgatcaaacaataaaattgaaacctaatgcgaaaaaatatgaatgtgatcaatgttca
gaagttttgtatttgacaccaactgatattttaaagcataaaaaatcacatttacagtga
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