Daktulosphaira vitifoliae (grape phylloxera): 126894625
Help
Entry
126894625 CDS
T09738
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126894625
09122 Translation
03013 Nucleocytoplasmic transport
126894625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126894625
03041 Spliceosome [BR:
dvt03041
]
126894625
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126894625
Spliceosome [BR:
dvt03041
]
Complex C
Other components
EJC/TREX
126894625
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126894625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
126894625
NCBI-ProteinID:
XP_050521719
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MDKLNYENWGANEKAVFLAKCHEFISNSKTDYSLTITNNGNPTDLAKGILSLLIACIKGK
LKINLGVSILDELCSNKEIASVIMDIFNFLDTETVLSENLGSERENFSSIVRDSQKLFTD
KLLKERLEIESLKDIKLLNNVFSTKFIKIKTKLFYKQRKYNLFREESEGFSKLVTELNSD
NMDPKVMLEIIKSLIGCFNLDPNRVLDIILDSFEHHTDNKAEHFFIPLLRDYMPESQRLT
EVLVFKLRQVNDMNHSSYRLIALLIQYNLIELENIYPWLTPDDKVIQKNWEKEMKNGQDY
VKKISCMFLSKAPESEVADDNDLVKFEENQKFLLCEAMLEVGDWNTAQILLKRFPEYYAV
DHPAIGDALCNLISQIIKPIYAEVFNLHSKFTRKTLKLSDNSFSVKPVSTFQEFHSIVMP
MLITLGPGLHRNTVLMFKIVRIVREALINEGIRNKDYIPSKNGYYFDTLSLLDRVLLPAL
SLVEGSSISEHLWTLLQLYPYHCRYALYNSWKNDTHKYHPKLLIKKVEVQKKAKSVMKRL
CKDNTKPSSRVIGKISHYAPGYLFDYILGQIQVFDNLGSIVVECLKYMTSLSFDVLGYCI
VETLGKSGQDRVKHDGTSISVWLQSTASFCGAVFKKHSIELTGILQYVANQLKTENSLDL
LILKEIVLRMAGIELMEQITPDQIEAMSGGDYLKIEAGYYNQIRNTKKSSVRLKESLLDN
NLAVALCLLIAQQRHSVIYKEHESMHIKLAGQLYDQCQDTLVQYGTFLGSTFSMEEYINH
LPSVHDLLDQHHVHMDVAFFLARPMFNHFINTRFDVLRKADPNSKKSLPARQTYYAEAYK
EVMSSIVNSVVPLHPEKVWEDVSPGFLVTFWSLTLYDLSVPNEAYKREINKLKTQSNALG
DSKQTSTKVKKEQDRLSTTIAKLNDEKKKQQEHVEKINYMLNQEKDTWFLSRSAKAAKNE
TITQFLQLCLFPRCIFTHTDAMYCAKFVQTLHSLKTANFSTLLCYDRLFCDITYSVTLCT
ENEAHRYGIFLNEMLKNVTRWHSTQEVFEKECATYPGFVTKCKNSDQFVQSSNDHVGYEN
FRHVCHKWHYKITKAMMVCLESKDYVQIRNSLIILIKIVNHFPVLAKLATLIDKKVEKVR
EDEKDKRQDLYTLATSYCGLLKGRANQFLKDSDFHQVNEKVSQTINANDIKSDVTKNAQV
LKKKENERSPEAKTPPPLPSKVLNGTTTTEWVEAEKKVIDNKIKTDKRSAKVTSILSNEK
NHENNVELEKESEQIDDHNEKKKEKRSRDENFDKENDSFFELSKNNLSKDSISSGPAVNH
SNKVHSQIISGEKPSINDIDSTNNGVYAGADKDIKRKRIDTSPVTKQTAKYNSDMKSETN
GSSLTEKKEKKLKKSQSSDSSVSKETRKERKISRKRIERREELTPELKRRKEDDKHIKSV
DIRHEDIANDKHRSSREKSPHLKEWTERESRHSKRHRTEKRK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggataaattaaactacgaaaattggggagctaatgaaaaagccgtatttttagctaaa
tgtcacgaatttatcagtaactcgaagactgattattctttgacaattactaataatgga
aaccccacagatttggccaaagggatactttcattattaatagcatgtattaaaggaaaa
ttaaaaatcaaccttggagtttctattttagatgagttgtgttcaaataaagaaattgca
tctgttataatggatatttttaattttttggatactgaaacagttctgtctgaaaactta
ggatcagaaagagagaattttagtagcattgtcagagattctcaaaagttatttacagat
aaactattaaaggagcgcttagaaattgaatcattaaaagacataaagttattaaataat
gtcttttctacaaagtttattaaaattaaaactaaacttttttataaacagcgaaaatat
aatctatttcgcgaagaatctgaaggcttttcaaaattagttactgaattaaactctgat
aatatggatccaaaagttatgttggaaattattaaatcattaattggatgtttcaattta
gatccaaatcgggttttagacattatcttagattcatttgaacatcatactgataataaa
gctgaacatttttttatacctttgttacgagattatatgcctgaatcgcagagacttact
gaagtgttagtttttaagttacgtcaagtcaatgatatgaatcattcatcctatagactg
attgctttacttattcaatataatttaatagaattagaaaatatatatccttggttaact
ccagatgacaaggttatccaaaaaaattgggaaaaagaaatgaaaaatggacaagattat
gttaaaaagatttcatgtatgtttttgtcaaaagctcctgaatctgaagtagctgatgat
aatgatttagtaaaatttgaagaaaatcaaaagtttttgttatgtgaagctatgcttgaa
gttggagattggaatacagctcaaatattattaaaacggtttcctgaatattatgcagta
gatcatcctgccattggagatgctttatgtaacctaataagtcaaataataaaacctatt
tatgcagaagtttttaatcttcattcaaaatttacaagaaaaactttgaagctctctgat
aattctttttctgtaaaacctgtatcaacgtttcaagaatttcatagtattgttatgcca
atgctgataactttaggtcctggattacatcgtaacactgttttaatgtttaaaattgtg
aggattgttagagaagctttaataaatgaaggaattagaaataaagattacataccttct
aaaaatggttattattttgatacattgtctttactagatcgtgttttattaccagctttg
tcattggttgaaggaagtagtatttctgaacatttgtggactttattgcaattatatcct
taccactgcagatacgccttatataacagttggaaaaatgatacacataaatatcaccct
aagttattgataaaaaaagttgaagttcaaaaaaaagctaagtctgtcatgaagcgcctt
tgtaaagataatacaaagccgtctagtcgagttattgggaaaatatcccattatgctcca
ggatatttatttgattatatattaggacaaatacaagtgtttgacaatttaggaagtatt
gtggttgaatgtttaaaatatatgactagtttatcttttgatgttcttggatattgtatt
gttgaaactttgggtaaaagtggtcaagatagagtaaaacacgatggaacttctatatct
gtttggcttcaaagtactgcctcattttgtggtgctgttttcaaaaaacattctatagaa
cttactggaatcttacaatatgtagcaaatcaattaaagactgaaaatagtttggattta
cttattcttaaagaaatagtcttaagaatggctggcatagaactcatggaacaaataact
cctgatcaaatcgaagctatgtcaggtggagattatttaaaaattgaagcaggatattat
aatcaaattagaaacactaaaaaatcttctgtacgattaaaagagtcattgttagacaat
aatttagcagtagcattgtgtttattaattgctcagcaacgacatagtgttatatataaa
gagcatgaatcaatgcatataaaacttgctggtcaactttatgatcaatgtcaagataca
ttggttcaatatggcacatttttggggtctacattttctatggaggagtacataaatcac
ttaccatctgttcatgatcttctagatcaacaccatgttcacatggatgtagcatttttc
cttgccaggcctatgtttaatcatttcatcaatacccgttttgatgtattacgtaaagca
gatcctaattctaagaagtcgttacctgctcgtcaaacatattatgctgaagcatacaaa
gaagttatgtcttctattgtaaattctgtagttcctttacaccctgaaaaagtttgggaa
gatgtatctcctgggtttttggtaacattttggtcattgacactgtatgatcttagtgtt
cctaatgaagcctataaaagggaaatcaacaaacttaagactcaatctaatgcactcgga
gactctaaacaaacaagtactaaagtgaagaaagaacaagataggttatctacaacaatt
gcaaagttaaatgatgagaaaaaaaaacaacaagaacatgttgaaaaaattaattatatg
ttaaaccaagaaaaggacacatggtttttatctcgttctgcaaaagcagctaaaaatgag
acaataactcaatttttacaattatgtttatttccacgttgtatttttacacacactgac
gctatgtactgtgcaaagtttgttcaaacattacattctctgaaaactgcaaatttttcg
actttactttgttacgataggcttttctgtgatattacttattcagtaacactttgcact
gaaaacgaagcacaccgatatggtatttttttaaatgaaatgttaaaaaatgtaactcgt
tggcattcaactcaagaagtttttgaaaaagaatgtgctacctatcctggatttgtaact
aaatgtaaaaatagtgatcagtttgtacagtctagtaatgaccatgttggatatgaaaat
ttcagacatgtttgtcataagtggcattataaaataactaaagcaatgatggtttgtttg
gaatccaaagattatgtacaaattcgcaattcattgattattttaattaaaatagttaat
cattttccagtattagctaaattagccacattaattgataaaaaagttgaaaaagtaaga
gaagatgagaaagataaacgacaagatttgtatacattagctacatcatattgtggacta
ctcaaaggtagagctaatcagtttcttaaagattcagactttcatcaagtcaatgaaaag
gtaagtcagacaattaatgctaatgatattaaatctgatgtcacaaagaatgctcaggta
ttaaaaaaaaaagaaaatgaaagaagtccagaagcaaaaactcccccaccattaccctct
aaagttcttaatggaacaacaacaacagaatgggtagaagcagaaaagaaagttattgat
aacaaaattaaaacagataagcgatcagcaaaagttacatcaatactatctaatgaaaaa
aatcatgaaaataatgtggaacttgaaaaagagtccgagcaaattgatgatcataatgaa
aaaaagaaagaaaaacgatctagagatgagaattttgataaagaaaatgattctttcttt
gaactttccaaaaataacttatctaaagattcaattagtagtggtccagctgtcaatcat
agtaacaaagtacattctcaaattatatcaggagagaagccttctatcaatgacatagat
tcaacaaataatggtgtatacgctggggctgacaaagatatcaaacgaaaacgaattgac
accagtccagttacgaagcaaactgcaaaatataactccgacatgaaatcagaaacaaat
ggatcatcacttactgagaaaaaagaaaagaaacttaaaaaatctcaatcttctgattcc
tcagtgtcaaaagaaactcgaaaagaacgcaaaataagtaggaaacggattgaaagaagg
gaagaattaaccccagaattgaaaagacgcaaggaagatgataaacatataaaatctgtt
gatattcgtcatgaagacatagcaaatgataaacatagatcaagccgtgaaaaatctcct
catttaaaagagtggactgaacgtgaatctcgacattcaaaaaggcatagaacagagaaa
agaaaatga
DBGET
integrated database retrieval system
