Daktulosphaira vitifoliae (grape phylloxera): 126894653
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Entry
126894653 CDS
T09738
Name
(RefSeq) collagen alpha-2(XI) chain-like isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126894653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dvt00536
]
126894653
Glycosaminoglycan binding proteins [BR:
dvt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126894653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Phlebovirus_G2
Glyco_hydro_59_C
Motif
Other DBs
NCBI-GeneID:
126894653
NCBI-ProteinID:
XP_050521775
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MLSKQNYLLFPILCYCSFTYFTIFPILAKFSNEVNILEATDLTEQSTGVSFTYGRCKNKT
AYKLNERAMLTVQTSQIFTELEHFPLDFSIISILRVDQGSVRNAVFTIYNEAGEEQLGLI
LGNDIQLLYNDIEARDDQKNILRFEYEVNDGQWHKLSFSVKGNSVTLILDCEQQFTQELK
RNTTISKSGILLVGQQLDETYYSGDIQELKLYSTPDAAYDNCEIWNELCNKTTFNNNLEV
SENINEIESTTTYIMSNTNTSITINRSENSIDPVLENQNTCFPSIRGYPGPPGEIGLAGP
KGEPGRDGIDGFTGIQGPPGHVFLIPLNQNQGDKGPDSQIEMFKQMISQHMMSMRGSDGP
MGLIGVTGPEGTPGPEGSKGDSGEQGEQGPRGIRGMPGPPGRDGHRGRPGRDGERGTTGP
PGVKGEPGVSGVVGLPGEKGDRGFPGQIGEAGSRGNDGPRGEEGPQGIAGIPGEMGPRGF
SGPRGFPGLPGPPGVPGSEGPAGPKGTTGNTGNLGPPGQIGPTGPIGSTGPPGALGPPGN
QGPQGKPGLPGLPGVDGAPGHPGNTGIAGSKGDIGPPGAPGSVGFPGSRGVKGDIGVRGL
PGEKGDKAERGADGEKGDQGVKGEPGIAGSSGLVGIEGPEGPKGSEGPRGESGSIGAQGE
KGKPGPNGLPGYPGSPGEKGDKGLYGKDGTPGEKGERGNTGLPGERGEIGPRGFRGARGR
AGTDGIPGSKGDTGQPGATGPIGERGIPGADGLRGFTGPPGASGPSGKDGLPGFPGERGP
PGDTGPIGITGVPGVIGTPGQPGEAGSMGEPGPSGQPGLPGEPGRPGDSGKEGLPGPVGL
PGKPGEPGSPGLPGFPGERGLPGTAGVIGLKGDMGPQGLPGSSGDKGQQGEIGKEGPQGS
EGRKGPPGVAGSVGLKGDKGEIGLPGPIGNDGSVGARGVPGPPGPVGPPGDDGDKGEIGI
PGEKGFKGSKGEIGPVGGLGNPGLRGEIGPIGLPGEKGPPGDLGRQGTKGEVGPPGLIGP
PGPPGTQGLPGLIGSKGEAGDIGAKGPVGAPGAPGEIGPRGLKGVEGQQGLMGTEGPPGP
KGEPGLTGFPGPQGLDGKHGDRGPIGPKGDDGKIGPQGSIGPRGNIGPEGPKGNAGVPGF
PGIQGEPGIQGPKGDRGKDGDDGKQGPPGLPGDIGSTGKPGVIGPPGRNGNEGPPGPQGS
SGSPGEKGDQGLSGGTGLPGPVGIPGPPGIQGLQGPMGSPGQAGDVGHPGKPGQIGETGK
IGDTGPQGEKGERGKRGPKGHPGDMGPVGIKGHEGEKGDKCERGDRGVEGPKGEMGPIGV
PGAKGNDGPPGIPGVEGLTGPKGIEGVAGNKGEQGLPGPPGPPGPPGEAPMIPPELSGYQ
QSSLARWRREIMNNEANNISSEFSNINNITLGTNENISDDPKYIDIVSSIYVMRQDLERI
KKPIGTRENPVMTCKDLFYGHPQFKDGWYWIDPNLGMPFDAVYVYCNMSSGGETCVFPDI
HSSQMPNIPWRKEADKTDWYSNLRGGFKITYEAVGPVQMNFLRLLSQSSYQNFTYTCINS
AAWFNTKTNSYDMAIKFMGDSQVMFSSELGSPKIDVRFDGCKTRKSKSETIFEIRTNKLN
SLPLTDFYPIDYGSPHQAFGFEVGPVCFK
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctaaacaaaattatttactttttccaatactgtgctattgttcttttacatat
ttcacaatttttcctattttggctaaattttcaaatgaagttaatattcttgaagcaaca
gacttgacagaacaaagtactggtgtcagtttcacttatggacgttgtaaaaataaaacg
gcttacaaattaaacgaaagagctatgttaactgtgcaaacatcacaaatttttacagaa
ttagaacactttcctctggatttttcaataatctctatattaagagtagatcaaggttca
gtaagaaatgctgtctttactatttacaatgaagcgggcgaagagcagttaggtctaatt
ttaggaaatgatattcagttactttataatgacattgaagcacgagacgatcaaaaaaac
attcttagatttgaatacgaagttaacgatggccaatggcataaattatcattcagcgtt
aaaggaaattcggtgactttaattttggattgtgagcaacagtttacacaggaactaaaa
agaaatacaacaataagtaaatcaggaatattattggttgggcaacagttagatgagaca
tattattcgggagatattcaagagttgaaactgtattcgacgcctgatgctgcgtatgat
aattgtgaaatttggaatgaattatgcaataaaacaactttcaacaataatttggaagtc
tcagaaaatattaacgaaattgaatcaactacaacttatatcatgtcaaatactaatact
agtattacaataaatagaagtgaaaacagtatagatccagtgcttgaaaatcaaaatact
tgttttccgtcaattcgaggatatccgggaccacctggagaaataggattagcaggtcca
aaaggagaaccaggtcgtgatggtattgatggatttactggaatacaaggacctcctgga
catgtatttttaattcctctcaaccaaaatcaaggagataaaggcccagatagtcagatt
gaaatgtttaaacaaatgatttcgcaacatatgatgtcaatgagaggaagtgatggacct
atgggtttaattggcgttacaggaccggaaggaacaccaggccccgaaggctcaaaaggt
gattctggagaacaaggcgaacaaggaccaagaggtataagaggaatgccaggaccgcca
ggccgcgatggtcacaggggcagacctggtagagatggagaacgaggaacaactggtcca
cctggcgttaaaggagaaccaggagtctcgggagtcgtaggcttaccaggagaaaaaggc
gatcgaggatttccaggccaaattggtgaagctggttctcgaggaaatgatggacctcga
ggagaagaaggtcctcaaggaatagctggtataccgggagaaatgggtccaagaggattt
tcaggaccacgtggatttcctggtttaccaggtcctcctggtgtacctggatctgaaggc
cccgcaggaccaaaaggaactacaggaaatacaggaaatcttggtcctccaggacaaatt
ggtcctaccggcccaattggaagcacaggacctccaggtgcattgggccctcctggtaat
caaggtcctcaaggaaaacctggacttccaggattacccggagtagatggagcacctggt
catccaggaaacactggaatagcaggttcaaaaggtgatattggtccaccaggtgcacca
ggttcagttggttttccaggatcacgaggagtaaaaggtgacattggtgttcgaggttta
ccaggagaaaaaggcgacaaagctgaacgaggcgctgatggagaaaaaggggatcaaggt
gttaaaggggagcctggaatagctggatcatcaggtcttgtgggtattgaaggacctgaa
ggaccaaaaggatcagaaggacctcgaggtgagagcggcagtattggagcacaaggcgaa
aaaggtaaacctggaccaaacggtttgccaggatatccaggatctcctggtgaaaaaggt
gataaaggattatatggaaaagatggtactcctggagaaaaaggggaacgtggtaatact
ggactaccaggagaaagaggagagataggaccccgtggatttcgaggtgctagagggcgt
gctggaactgatggaattcctggatcaaaaggtgatactggccagcctggcgcaacgggt
cctattggagaacgaggaatacccggtgcggatgggttaagaggttttactggacccccc
ggggcttctggtcctagcggtaaagatggtcttccaggttttccaggagaaagaggtcca
ccaggggacactggaccaataggtattactggcgtccctggagttattggcaccccagga
caaccaggagaggcgggatccatgggtgaacctggaccatctggacagcctggtttaccg
ggtgagccaggaagacctggtgattctggaaaagaaggacttccgggaccagttggatta
ccaggaaaacctggagaaccaggttctccaggattacctggctttccaggagaaagaggt
ttaccaggaacagctggagttattggtcttaaaggagatatgggacctcaaggattacca
gggtcatctggtgataaaggacaacaaggagaaattggaaaagaaggaccacagggttct
gaaggacgtaaaggacctcctggtgtagctggttccgttggtttaaaaggagataaaggt
gaaatcggacttccaggtccaataggaaatgatggctctgtaggagctaggggagttcca
ggtccacctggtcctgttggtccacctggagatgatggagataaaggtgaaattggtatt
cctggagaaaaaggatttaagggatctaaaggagaaataggtcctgttggtggactagga
aatccaggtctcagaggagaaatcggtccaataggattacccggagaaaaaggaccacct
ggtgacttaggaagacaaggaactaaaggagaagtaggacccccgggattaataggacca
cctggtcctcccggaactcaaggcttaccaggacttataggatcaaaaggtgaagctggg
gatattggtgctaaaggacctgttggagctccaggagcaccaggtgaaatcggaccaagg
gggttaaaaggtgtggaaggacagcaaggattaatgggcactgaaggtcccccaggccct
aaaggggaaccaggtttaactggttttccaggtccacaaggcctcgatggaaagcacggt
gaccgtggtcctattggtcccaaaggcgatgatggtaaaataggaccacaaggttcaatc
gggccaagaggtaacataggtccggaaggccctaaaggcaatgcaggagtaccaggattc
ccaggtattcaaggagaacctggaatacaaggaccaaaaggtgatagagggaaagatgga
gatgatgggaaacaaggccctccagggcttccaggcgatatagggtctacaggaaaacct
ggagtcattggtccaccaggacgaaatggtaatgaagggccgccgggaccacaaggtagt
tctggttctcctggtgaaaaaggcgatcaaggactatcaggtggtactggtttaccagga
ccagttgggatcccaggacctcctggtatacaaggacttcaaggaccaatgggatctcca
ggacaagcaggagatgttggacatccaggaaaacccggccagatcggtgaaactggaaaa
attggagatacaggtcctcaaggagaaaaaggagaaagaggaaaacgaggtccaaaaggt
catcctggagatatgggaccagtaggaataaaaggtcatgaaggagagaaaggtgacaaa
tgtgaacgcggcgaccgtggcgtagaaggaccaaaaggagaaatgggtccaattggagta
cctggagctaaaggaaatgatggtccaccaggaattcctggtgttgaaggtttgactgga
cctaaaggaattgaaggggtagcaggaaataagggtgaacaggggcttccaggcccacct
ggtcctccgggaccaccgggagaagcgccaatgattccacctgagttatcaggataccag
caaagctctttagcacgttggagaagagaaattatgaataacgaagccaataatataagt
tcagaattttctaatattaataatatcacattaggaacaaatgaaaacatttccgacgac
ccaaaatacattgatattgtcagttcaatttacgtaatgaggcaagatttagaaagaatt
aaaaaacctattggaacccgagaaaacccagtaatgacatgtaaagatttattttacgga
catccccaattcaaagatggatggtattggatagaccctaacttgggaatgccatttgat
gctgtatatgtatactgtaatatgagcagcggaggtgaaacgtgcgtgtttcctgacatc
cattctagtcagatgccaaacattccgtggcgaaaggaagccgataaaacagactggtac
tcaaacttaagaggtggttttaaaataacatacgaagcggttggacccgtccaaatgaat
tttcttcggcttttaagtcaaagtagctatcaaaattttacttatacgtgtattaatagc
gctgcttggtttaacacaaaaaccaactcatatgacatggcaattaagttcatgggagat
agccaggtgatgttctcctcagagcttggatctccaaaaattgacgttagatttgacggg
tgcaagacacgaaaatcaaagagcgaaacaatttttgaaattcgcaccaataaacttaac
agtttaccacttacagacttctatccaatcgattatggttctccgcatcaagcatttgga
tttgaagtgggtccagtatgcttcaaatag
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integrated database retrieval system
