Daktulosphaira vitifoliae (grape phylloxera): 126894780
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Entry
126894780 CDS
T09738
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126894780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126894780
03012 Translation factors [BR:
dvt03012
]
126894780
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126894780
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126894780
Translation factors [BR:
dvt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126894780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_19
nSTAND3
AAA_22
ATPase
ResIII
AAA_14
AAA_24
NPHP3_N
AAA_7
SRP54
T2SSE
AAA_23
PhoH
Sigma54_activat
AAA_16
Motif
Other DBs
NCBI-GeneID:
126894780
NCBI-ProteinID:
XP_050521993
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MPPMKPFRIGKQTGPKDKNKGPRQSKPKTNHSEDSSVSDIDKPSGSNNQSKRHPSHLKGR
EIGLWYAHRASQKEDEELLNVNKRGIGLKLKPPPYLRGHDLDLWHKEQNRLWQHAQKKEK
QKELGKCFIKLRIEGIGHVEILALQLETEMPIIEEYKPKLFSKNLSSKIVSSKISNFRNL
NCYSLDDEDIDENAEYIMDRYKKLEDSNFKRKFLDHITGSIEDNLIASVQSNLKLQNDEM
KNSALKNELEAKFKTPKYRSMCEFRKKLPSYSKKDEILNLIKANQVVLISGETGCGKTTQ
IAQFILDDAILSDNGSTCRIVCTQPRRISAISVAERVADERAERVGERSVGYQIRLERRL
SRDYGSILFCTTGILLQQIQQDSALKYYSHVIIDEIHERDTISDFTLTILKSIILVRPDI
KVILMSATLNASAFSKYFDECPTLNIPGFTFPVEELYLEDIYTLNGFRYFPKKLVHKTRK
VRPGDPFNEFVIPYVNNMRRLKKYPNSVLNWLENPFSEDFDYDLLVELINYICNNKEDGA
ILVFLSGWDQISKLTRILRDKGYGNTSKFILISLHSMLPTVSQKSVFDSPPKGIRKIILS
TNIAETSVTIDDVVYVINNGRMKLKGFDAENNIGTLKEEWVSVANARQRRGRAGRVKPGI
CYHLYTRGREQSFDDYVLPEMMRTSLEEVILQAKILQVGMVTQFLEKVMNPPDSKALEVS
LKLLTDLNALDEKENLTPLGFHLAKLPIGPLEGKMIILGAMFSCLSPIMTIAASLNFKDP
FVMPLNKEQQCREVKKEMDEGNQSDHLLVTRAMSKFLKAKQTNKAWDFCRDNFLMHNTMN
MISELKSQYAKYLCDLGFIKSSNYSDVEYNRNSSNVKLLKCVLVAGLCPNIAVSQTKVKS
SGRKLSKYVTAEDGKVDIHPKSVNAGDCYFESPLLLYHTKLKTSSIFLHDTTMVYPFPVV
LFANHLKITGEKTDHVTFSLNSQINFTCSARTSNFIKTVRNRLKWLIDYLMSHPEEISSD
SKSISTRALQLVVDLVSAEEHPGVLDFSHLF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctatgaaaccttttaggataggaaaacaaacaggacctaaagataaaaataag
ggtccaagacaatctaaaccaaaaacaaatcacagtgaagatagttctgtaagtgatatt
gataagccttctggttcaaataatcagtctaaacgccacccatctcatcttaaaggtcga
gaaataggtctctggtatgcacatagagcaagccaaaaagaagatgaagaattactaaat
gttaataaaagaggcataggactaaaacttaaaccacctccttatttaagaggtcatgat
ttagatttatggcataaagaacaaaatcgattatggcaacatgctcagaaaaaagaaaaa
caaaaggaacttggcaaatgttttatcaagttaagaattgaaggcattggtcatgttgaa
atcttagctcttcaattggaaacagaaatgccaattattgaagaatataaacctaagtta
tttagtaaaaacttaagttcaaaaattgtgtcttcaaaaatttcaaactttagaaattta
aattgttattcattagatgatgaagatattgatgaaaatgctgaatatataatggacaga
tataaaaaattagaagattcaaattttaaaagaaaatttcttgaccatataactggatca
attgaagataatttaattgcttcagtgcaaagtaatttgaaacttcaaaatgatgaaatg
aaaaattctgcattaaaaaatgaattagaagcaaaatttaaaactcccaaatatagatct
atgtgtgaattccggaaaaagttaccttcatacagcaaaaaagatgaaattttaaatcta
ataaaggcaaaccaagttgttttgattagtggtgaaactggttgtggaaaaactacacaa
atagctcaatttatattagatgatgcaattttatcagacaatggttcgacgtgtagaatt
gtttgtactcaaccaagaagaattagtgctatatcagtagcagaacgagtagctgatgaa
cgagcagagcgtgtaggagaaagaagtgtaggatatcaaattcgattagaaagacgttta
agtagagattatggatctattttattctgtactacaggaattttacttcagcaaatacaa
caggattctgctttgaaatattactcgcatgtgattattgatgaaatacatgaacgtgat
actattagtgattttactcttacaatcctcaagagtattatactagtgagacctgatata
aaagttatattaatgagtgctactttaaatgcatctgcattttctaaatattttgatgaa
tgtccaactttgaacatacctggttttacttttccagttgaagagttatatcttgaagat
atttatacactaaatggttttagatattttcccaaaaaattagtgcataagactcgaaaa
gtacgcccaggtgatccattcaatgaatttgtcataccatatgtgaataatatgagacgt
ttgaaaaagtatccaaattcagtattaaattggttggaaaatcctttttctgaagatttt
gactatgatcttctcgtagaacttataaactatatttgcaataataaagaagacggagct
attcttgtatttttatctggatgggatcaaatatcaaagttaactagaattttaagagat
aaaggttacggaaatacatcaaaatttatactaatatcattgcattctatgcttcctact
gtatctcaaaaatcagtatttgattcaccacctaaaggcatacgtaaaattatcctgtct
actaatatagcagaaacttcagtaacaattgatgatgttgtatatgtaattaataatgga
cgtatgaagctaaaaggatttgatgctgaaaataatattggtactttaaaagaagaatgg
gttagtgttgctaatgctagacagcgtcgtggtagagcaggtcgtgtgaaaccaggaatt
tgttatcatctttacactagaggacgtgaacagtcatttgatgattatgttttaccagaa
atgatgcgtactagtttagaagaagtgatacttcaagctaaaattttacaagttggtatg
gtaacacagttcttagaaaaagttatgaatcctcctgatagtaaagctttagaagtttcc
ttaaaactattgactgatttgaatgctctcgatgaaaaagaaaatttaacaccattaggt
tttcatttagcaaaattaccaattgggccactcgaaggaaaaatgattattttaggtgca
atgtttagctgtttaagtccaattatgacaatagctgctagtttgaacttcaaagaccct
tttgtcatgccattgaataaagagcagcaatgtcgtgaagttaaaaaagaaatggatgaa
ggtaatcaaagcgatcatcttttagttactagagcaatgagtaaatttttgaaagcaaaa
caaacaaataaagcttgggatttctgcagagataattttttaatgcataataccatgaat
atgatatctgaacttaaatctcaatatgctaaatatttatgtgatcttggatttattaaa
tcttctaattattcagatgtagagtacaacaggaactctagtaatgttaaacttttgaag
tgtgttttagttgctggtttatgtcctaatatagctgtatcccaaactaaagtgaaatca
agtggccgcaaactatcaaaatatgtgactgctgaagatggcaaagtagatattcatcct
aaatccgtcaatgctggagattgttattttgaaagtccattattgctgtatcacactaaa
ctaaaaacaagttctatatttttgcatgatacgactatggtttatccgtttccagttgtt
ttatttgctaaccatcttaaaataactggtgaaaagactgatcatgtaacttttagcctt
aactctcaaatcaattttacttgttctgcaagaacatctaattttattaagactgttcgc
aatagacttaaatggctaattgattatttgatgtcacatccagaagaaataagttcagac
tcaaaatctattagtacaagagcacttcaacttgttgttgatttagtgtctgcagaagaa
catcctggtgttttggacttttctcatttgttttaa
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