Daktulosphaira vitifoliae (grape phylloxera): 126895108
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Entry
126895108 CDS
T09738
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126895108
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
126895108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
zf_CCCH_4
RuvA_C
Motif
Other DBs
NCBI-GeneID:
126895108
NCBI-ProteinID:
XP_050522563
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MDVNPSNNKLSVEKSKRQLVIQRLDSIKNLFGCDLHITEESTDNCTFIVSRLDKYRVLDD
DLIRRLKCYVDSLNDLQQGLGECSNDDSSYDSDFGGDEDATSASFSHLDISRTTSDTLGA
EYADYISAPAYKSRVDFALKLGYTERLVQAALNKLGSEPTQDQLLAELIKLGAQCGHKLL
GDSDGEEIQSLNSNDQNIQSPKLRHIVIDGSNVAMSHGNKETFSCRGIKICVDWFRMRGH
TDITVFVPKWRKEASRPDNRIIDQEILLDLERARMLVFTPSREIGGKRMVCYDDRYILRL
AAELDGVVVSNDNYRDLANESPAFRSVVQNNILMYSFVNDRFMPPDDPLGRSGPTLEVFL
RSKAPGVGLTAVSSETCPYGKKCTYGNKCKFSHPERGHQPIKSVTERLLEHAQRQSLTSR
QVKGKSMSLPLQSGSISKKPLTRTRSNIPQSNYPQQSWGMWSSNTFLESETESDNLHSKL
QRQLTLNPIYDPRLQQLRKSQHCNVTRIASAPPVPAPISTTQSIGASCSDPQLFPNYQEA
RHKLYYHLSSIFPEEQVSTAMQYYPNETNPQKICAAILNMFPKT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaatccgtcaaacaacaaattgtcggtcgaaaagtctaaaagacaattggtt
attcaacgattggattctataaaaaatctttttggatgtgatttgcatataactgaagaa
agtactgataattgtacattcattgtcagtagattagacaaatacagagtattagatgat
gacttgattagaagattaaaatgttatgttgactcgttaaatgatcttcaacaaggatta
ggagaatgtagcaatgatgattcaagttatgattcagattttggaggtgacgaagacgcc
actagtgctagttttagtcaccttgatattagtcgaacgacttcagacacattaggagct
gaatatgcagactatattagtgctccagcatataaatctagagttgactttgctcttaaa
cttggttatactgaaagattagtacaagctgctttaaataaattaggttctgaacctact
caagatcaacttttagctgaattaattaaactcggagctcagtgtggacataaattatta
ggcgattctgatggagaagaaattcaatctcttaattcaaatgatcaaaatatacaatct
cctaaactcaggcacattgttattgatggaagcaatgtagctatgagtcatggtaacaag
gagactttttcatgtcgtggtatcaaaatttgtgttgattggtttcgaatgagaggtcat
acagatataacagtttttgtgcctaaatggcgaaaagaagcatcaagacccgataaccga
attattgatcaagaaattttattagatttggagcgtgcaaggatgttggtttttactcct
tctagagaaattggtggaaaaagaatggtttgctatgatgaccgttacattttacgatta
gcagcagagttagatggtgtagtagtatcaaatgataattaccgagatttggcaaatgag
agtcctgcattccgttcagtagttcagaacaatattttaatgtattcttttgttaatgat
agatttatgcctccagatgatcctttagggaggtcaggtccaacattagaagtattttta
cgaagtaaagcacctggtgttggtttaactgctgtaagtagtgaaacatgtccttatggt
aaaaaatgtacgtatggaaataagtgtaaatttagccatcctgaaaggggacatcaacct
ataaagtctgttactgagcgattattagaacatgctcaacgacaatctctaactagtcgc
caagtcaaaggaaaatctatgagtttaccattgcaatcaggaagtatttctaaaaaacct
cttacacgtactagatcaaatatccctcaatctaattatcctcaacaatcatgggggatg
tggagttccaacacttttttagaatcagaaaccgaatctgataatcttcacagcaagctc
cagcgacaattaacattaaatccaatatatgatccacggttacaacaacttcgtaaaagt
caacattgcaatgttactagaatagcttctgcaccaccagtacctgctccaatatctact
acacaatcaataggagcaagttgctcagatccacaattatttccaaattaccaggaagcc
aggcataaactttactatcatttatcttcaatatttcctgaagaacaagtgtccacagct
atgcaatattatccaaatgaaacaaatcctcaaaaaatttgtgcagccatattaaacatg
tttcccaaaacatga
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