Daktulosphaira vitifoliae (grape phylloxera): 126895377
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Entry
126895377 CDS
T09738
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126895377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvt03400
]
126895377
DNA repair and recombination proteins [BR:
dvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126895377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
HPIH
DUF592
Motif
Other DBs
NCBI-GeneID:
126895377
NCBI-ProteinID:
XP_050523143
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MAVKPVNHLNLDPEQQKSFVLFYKSLPEKPLTTVRFFNRQDYYTVHGQDAVFAAKDFYKT
NHLIKIIGSDGDTLESLIFNKANFEAYIKQLLLINHYRVEIFINKGGKWTIEFKGSPGNL
TQFEDLLFANVEQIEANTVIALKLGPDFRNNKIVGLGAVDSVERKFQLSEFTDDEYFSHT
ESMVIKVSPKECVLMIDGSNPDFEQLKKVVERCGVLVTSRKKVDFSTDSLVQDLNQLILF
EEGQQLNAHTLPQLHLETACGALAAAIKYLELSSDSDNLNQFTVENLNYDKFVHLDSAGV
EALNLIPTPGTISKNDSILGILDKCRTPHGHRLLTQWIKQPLRDLNKINERLDIVESLIN
DTDVRQQLHDQHLRLIPDLQALMRKIQRKKANLQDCYRIYHAVQKLPSLVETLNNSDHKT
LNSVIVMPLKELVNDMCNYQSMIEETIDFTLVERGDFLIQSGFDEELQEMRNQMDELEKK
MKSNLTKTSETLQIQVKLDSNSQYGFFFKASLKDGKTVSNNKSYEVLDTTKGGGMRFRSS
KLTELNNDYQTIHQKYVEHQKSIVEEVIKTASSYNGTLINLSRTLAHLDVLTSFAMLAAS
SLRPYVRPVLNPQGTGLLDLKQVRHPCVELQDSVSFIPNDAYFKQGECTFNVITGPNMGG
KSTYIRSVATAVFMAHLGSFVPCDSAEISVVDAILARVGANDSQIKGLSTFMVEMIETVS
ILKKATVESLVIIDELGRGTSTYEGCGIACAIAERLATETKAFTLFATHFHELTKLSETI
PSIINKHVTAVTSENNLTLLYQVQQGSCDKSFGIHVAIMAKFPENVIQDASKKLSLLESF
QNQSNSENKQNELNEADKEKFLNECKRYAKEQTSSDQDLFNQIKRLRTEFL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaaaccagttaatcacttaaatttagatcctgagcaacaaaaaagttttgtt
ttgttttataaatcattaccagaaaaaccattaacaactgtacgttttttcaaccgtcaa
gattattacaccgtacatggtcaagatgcagtgtttgctgcaaaagacttttacaaaaca
aatcacttaataaaaattattggatctgatggtgatacattggaatcattaatatttaat
aaagctaattttgaagcttatattaagcaattattattgataaaccattatcgtgtagaa
atattcatcaataaaggaggaaaatggacaatagaatttaaggggtctcctggaaattta
acccaatttgaagatcttttgtttgctaatgtagaacaaatagaagctaatacagtaata
gctttaaaattaggtccagattttagaaacaataagattgtaggattaggagctgtagat
tctgtggaaagaaaatttcaactaagtgaattcactgatgatgaatatttttctcataca
gagtctatggtgataaaagtatcccctaaagaatgtgtgctcatgattgatggttcaaat
cctgattttgaacaattgaaaaaagttgtagaacgttgtggagtactagtaacttcaaga
aaaaaagtagatttttccactgattcattagttcaagatttgaaccaattaatattattt
gaagaaggacagcaactcaatgctcatactttaccacaacttcatcttgaaacggcttgt
ggcgctttggcagcagcaattaaatatcttgagttgtcatcagattcagataatctcaat
cagtttactgttgaaaatttaaattatgataaatttgttcatttggatagtgcaggtgtt
gaagctctaaatcttataccaacccctggaactatatcaaaaaatgattcaattttagga
atcttggataaatgtagaactccacatggtcacagattgttaacacaatggataaaacaa
cctctaagagacttaaataagatcaatgagcgtttagatattgttgaatcccttattaat
gacacagatgtccgtcagcagttacatgaccaacatttaagattgatacctgatcttcaa
gctctaatgcgtaaaatccaaagaaaaaaagccaatttacaagattgttacaggatatac
catgctgtccaaaaactacctagtcttgtagaaaccttaaataattctgatcataaaact
ttgaatagtgtaattgtcatgccattaaaagaattagttaatgacatgtgtaattatcaa
tccatgattgaagaaactattgattttacacttgttgaacgtggagattttttaattcaa
tcaggatttgatgaggaattacaggaaatgagaaatcaaatggatgaactggaaaaaaaa
atgaaatcaaacttgactaaaacttctgaaacattacaaatacaagtcaaattagactca
aattcacagtatggattttttttcaaagcttctttaaaagatggtaaaacagtatcaaat
aataaatcttatgaagtacttgatacaacaaaaggtggtggaatgcgttttagatcttct
aaattaacagaacttaataatgattaccaaactattcatcagaaatatgtagaacatcaa
aaatctatagtagaagaagttattaagacagcaagcagctataatggaactcttattaat
ctcagtcgaacattagcacatcttgatgttcttactagttttgctatgttagcagctagt
tcattacgtccttatgttagaccagtattgaatcctcaaggaacaggtttattagatttg
aaacaagtaaggcatccttgtgttgaattacaagattctgtatcttttattcctaatgat
gcttactttaaacaaggtgaatgtacttttaatgtgataactggtcctaatatgggtggt
aagagtacttatattagaagtgttgctactgcagtatttatggcacatttaggaagtttt
gtgccttgcgatagtgctgaaatcagtgttgttgatgctattttagctcgtgtaggagca
aatgattcgcaaatcaagggtttatctacatttatggttgaaatgattgaaactgtgtct
atacttaaaaaagcaactgttgaatctttagtaatcattgatgagttaggaagaggaaca
tctacttatgaaggttgtggaatcgcatgtgctattgcagaacgtctcgcaactgaaact
aaagcatttacattgtttgccactcattttcacgaacttacaaaactcagtgaaactata
cctagtatcataaataaacatgttactgctgtaacctctgaaaacaatctaacactttta
tatcaagtacaacaagggtcatgtgataaaagttttggaattcatgttgcaattatggct
aaatttccagaaaatgttattcaagatgcttctaaaaaactttctctattagaaagtttt
caaaaccaatcaaactccgaaaataaacaaaatgaattaaatgaagctgataaagaaaag
tttctaaacgaatgcaaaaggtatgccaaagaacaaacttcatctgaccaggatttattc
aatcagataaaaagacttagaacagagttcctttaa
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