Daktulosphaira vitifoliae (grape phylloxera): 126895607
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Entry
126895607 CDS
T09738
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03015
mRNA surveillance pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126895607
09122 Translation
03013 Nucleocytoplasmic transport
126895607
03015 mRNA surveillance pathway
126895607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126895607
03041 Spliceosome [BR:
dvt03041
]
126895607
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126895607
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126895607
Spliceosome [BR:
dvt03041
]
Complex C
Other components
EJC/TREX
126895607
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126895607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
126895607
NCBI-ProteinID:
XP_050523638
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MADADDLLDYEEDEQNETVENDDKKQTKKEVKGNYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAMLGMDILCQAKSGMGKTAVFVLSTLQQLEVYESEVYALVLCHTRE
LAFQISKEFERFTKYLPAVKVSVFFGGVPITKDEDTLKNNKPHVVVGTPGRILELIRKKK
LVLNNLKHFILDECDKMLEILHMRSDVQEIFKNTPFNKQVMMFSATLSKDIRPVCKKFMQ
QPLEVYVDDDAKLSLHGLQQYYVKLTEKEKNKKLFDLLDELEFNQVIIFVKSVQRCVVLT
ELLNEQNFPSVAMHGGMSQQDRLKFYQEFKDFQKRILVATNLFGRGMDIERVNIVINYDM
PEDTDTYLHRVARAGRFGTKGLAITFICEETDAKVLNSVQDRFDVTIGRMPNEIELSSYV
ERK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcagatgatcttttggattacgaagaagacgaacaaaatgaaactgtagaa
aacgatgataaaaaacaaaccaaaaaagaagttaaaggtaattatgtgtcaatacatagt
tcaggcttccgtgatttcttattgaagccagaaatcttacgagcaattgttgactgtggt
tttgaacatccatctgaagtacaacatgaatgtattcctcaggctatgctgggcatggac
atcttgtgccaggctaaatctggtatgggaaaaactgctgtatttgtattatcaacatta
caacagttagaggtttatgaaagtgaagtttatgcattagttctttgtcacacaagagaa
ttggcatttcagataagtaaagaatttgaacgctttactaaatatttaccagcagtcaag
gtcagtgttttttttggtggtgtaccaattacgaaagatgaagatacattaaagaacaac
aagccacatgttgtagttggtacgccaggccgtattttagaacttatcagaaaaaaaaaa
ttagtccttaataatctgaagcattttatcttggatgaatgtgataaaatgttagagatt
ttacatatgcgaagtgatgttcaagaaatatttaagaatacaccttttaataagcaagtt
atgatgttcagtgctacacttagtaaagatattcgtccagtttgtaaaaaattcatgcag
caaccattagaagtatatgttgatgatgatgccaaactatcattacatggacttcaacag
tattatgtaaaattaacagagaaggaaaaaaataaaaaactatttgatcttttagatgaa
ttagaatttaatcaggtgattatatttgtgaaatctgttcagcgatgtgttgtattaaca
gaattgttgaatgaacaaaattttccatctgttgcaatgcatggtggtatgtcgcaacaa
gatcgtcttaagttttaccaagagtttaaagatttccaaaaacgaattttggtggccact
aatttatttggtcgtggcatggatattgagcgtgttaacattgtcatcaattatgatatg
ccagaagatacagatacgtacctccaccgggtagcaagagcaggacgttttggtacaaaa
ggacttgctataacatttatatgtgaagaaacagatgctaaagtgttaaatagtgttcaa
gatagatttgatgttacaattggacggatgccaaatgaaatagaactcagttcatatgtt
gagcgaaaataa
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