Daktulosphaira vitifoliae (grape phylloxera): 126897865
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Entry
126897865 CDS
T09738
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03015
mRNA surveillance pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126897865
09122 Translation
03013 Nucleocytoplasmic transport
126897865
03015 mRNA surveillance pathway
126897865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126897865
03041 Spliceosome [BR:
dvt03041
]
126897865
03009 Ribosome biogenesis [BR:
dvt03009
]
126897865
03012 Translation factors [BR:
dvt03012
]
126897865
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126897865
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126897865
mRNA cycle factors
Stress granule specific factors
126897865
Spliceosome [BR:
dvt03041
]
Complex C
Other components
EJC/TREX
126897865
Ribosome biogenesis [BR:
dvt03009
]
Eukaryotic type
90S particles
Helicases
126897865
Translation factors [BR:
dvt03012
]
Eukaryotic type
Initiation factors
eIF-4
126897865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
AAA_30
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
126897865
NCBI-ProteinID:
XP_050527754
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MASSASNRTSRLLPDDLSHVEFETSEDVEVLSTFDGMHLREDLIRGIYSYGFERPSAIQQ
RAIKPMIKGRDVIAQAQSGTGKTATFSIAMLQSIDTQLRDTQVLCLSPTRELAVQIQKVV
LALGDYLNVQCHACIGGTNLGEDIRKLDFGQHIVSGTPGRVFDMIRRKTLRTRNIKTLVL
DEADEMLNKGFKEQIYDVYRFLPPATQVILISATLPHEILEMTNKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCSTKRKVDWLTEKMRESNFTVSS
MHGDMPQKERDAIMKEFRAGQTRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttctgcaagtaatagaacgtctcggttattacctgatgatttgtctcatgtc
gaattcgaaactagtgaagatgttgaagtactctctacctttgatggcatgcatttgcga
gaagacttgattcgtggtatttattcatatggctttgaacggccttcagccattcaacaa
agagctatcaaaccaatgattaaaggaagagacgttattgctcaagctcaatcaggaacc
ggtaaaacagctacattctccattgctatgttacagtctatcgacacacaactaagagat
acacaagtattgtgtttatcgccaactcgagaacttgctgtacaaatccaaaaagttgtt
ttggcattaggagattacttaaatgtacaatgccatgcatgtataggtggtactaatctt
ggagaagacattaggaagttagattttggtcagcatattgtttctggaacacctgggcgt
gtttttgatatgattagacgtaaaacattgcgtacaagaaatatcaaaacattagtatta
gatgaagctgatgaaatgctgaacaaaggttttaaggagcaaatttatgatgtctatcgt
tttttgcctcctgcaactcaagtcattcttatttctgctactttacctcatgaaattttg
gaaatgacaaacaaatttatgactgaccctattagaatattggtaaaacgtgatgaattg
acattagaaggaattaaacaattctttgttgctgtagaacgggaagaatggaaatttgat
acattgtgtgatctgtatgatactttaacaataacacaagcagttattttctgtagtact
aaaagaaaggtcgattggttgacagaaaaaatgagagaatcaaattttactgtaagttca
atgcatggtgatatgcctcaaaaagagagagacgctataatgaaagaattccgtgctggt
cagacgagagttcttattactacagatatttgggctcgtggtattgatgtacaacaagta
tcattagttattaattacgatctaccaaacaatcgtgagttgtacattcacaggattggt
cgttcgggtagatttggccgtaaaggtgttgcaataaactttgtaaaaagtgatgacata
agaattttacgtgatattgaacaatattattccacccaaattgatgaaatgcccatgaat
gttgctgatttgatctaa
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