Daktulosphaira vitifoliae (grape phylloxera): 126898430
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Entry
126898430 CDS
T09738
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03030
DNA replication
dvt03420
Nucleotide excision repair
dvt03430
Mismatch repair
dvt03440
Homologous recombination
dvt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126898430
03420 Nucleotide excision repair
126898430
03430 Mismatch repair
126898430
03440 Homologous recombination
126898430
03460 Fanconi anemia pathway
126898430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvt03000
]
126898430
03032 DNA replication proteins [BR:
dvt03032
]
126898430
03400 DNA repair and recombination proteins [BR:
dvt03400
]
126898430
Transcription factors [BR:
dvt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126898430
DNA replication proteins [BR:
dvt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126898430
DNA repair and recombination proteins [BR:
dvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126898430
MMR (mismatch excision repair)
126898430
DSBR (double strand breaks repair)
HR (homologous recombination)
126898430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
GDH2_N
SecIII_SopE_N
Motif
Other DBs
NCBI-GeneID:
126898430
NCBI-ProteinID:
XP_050528390
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MGMNYESILSKGSIQALMNNEEVKEPVMQVLGSRKIAASGTDERYRLLISDGLNHNSFAL
LASQLNGMVSSGELSDFAIIKIKRHIISNVTDRTKSNKQVLLLLDISVLVKGSDVGLKIG
DPKPIIDAVSSNNSVSTKVSTNQKVSPIKPQSSNLNNNFQNNIDAIHPLNSLSPYQNKWT
IRVRIMNKSAIRTWTNQRGDGKLFSMDLVDEHGEIRATAFNNECDKFYDMIEVNKVYFIT
KGIVKTANKKYTNLNNDYELTLNGETQIFPCHDFDDTQMPAMKFNFISLNVIKNLDIDSM
VDVIGVCQHTSDIVNLVSKTTKKDLRKRDITLVDQSLSSVTVTLWDNLAEEFDGSLQPVV
AIKGSKIREFMGSKSLSLMGSSIIQINPDIEDSHRLRGWYDALPSTVEFNSISTRSESGT
NSQFHTIKSAQIAQLGSGDKADYYSMYSYLVFIKGDSALYKACPKADCQKKVIDRNDGTY
RCEKCNDESENFKYRLLLQAQLCDTTSSQWVTMFQEAGEGLLGINTSELGKLYDNDKEEY
NNVIHKKIFKMFETRVRAKLETYNNETRLKVSVMNMKPVDYKLASSKLITDIKRLSGMGT
SSM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaattatgaatccattttaagtaaaggctcaatacaagccctaatgaataat
gaagaagtaaaagaacccgtgatgcaagttcttggttctagaaaaattgctgcatctggt
actgacgagaggtatcgtttgcttatttctgatggtttgaatcacaattcttttgctcta
ttagcgtctcaattaaatggtatggtatcatctggtgaactttcagattttgctattatt
aaaataaaacgtcatataattagcaatgttactgatcgtacaaaaagtaataaacaagtt
ttacttctattggacatatcagttttagtaaagggaagtgacgttggcctaaaaattggt
gatcctaaaccaattattgatgcagtttctagtaataattctgtttcaactaaagtatca
actaatcaaaaagtttcaccaataaaaccacagtctagtaacttgaataataactttcaa
aataatattgatgctattcatccattaaattcattgagtccttatcaaaataaatggact
attagagtaagaatcatgaacaaatcagctattcgtacatggactaatcaaagaggagat
ggaaaactctttagtatggacctggtagatgaacatggtgaaatacgagctactgctttt
aacaatgagtgtgataaattctatgatatgattgaagtgaataaggtgtattttattact
aagggtattgttaaaacagccaataaaaagtatactaacttgaataatgattatgaatta
actcttaatggcgaaacacaaatatttccttgccacgattttgatgacactcaaatgcct
gctatgaaatttaattttatttcattaaatgtaattaagaatctagatattgatagtatg
gttgatgttataggagtgtgtcaacatacatctgatattgtaaatctagtttcaaagact
acaaaaaaagatttgagaaaaagagacattaccttggtagaccagtctttaagttctgta
actgtaactctttgggacaatcttgcagaggaatttgatggctcattacagcctgttgta
gcaataaaaggaagtaaaatacgtgaatttatgggaagtaagtcattgtctttaatggga
tcgtcaataattcagattaatcctgatattgaagattctcatcgtttaagaggttggtat
gatgctcttccttcaacagtagagtttaatagtatatctacacgttctgaaagtggaact
aattcacaatttcatactattaaaagtgctcaaattgctcagcttggcagtggagataaa
gctgattattacagtatgtactcatatttagtcttcataaaaggtgattctgcactttac
aaagcatgtccaaaggctgattgtcaaaaaaaagtaattgacagaaatgatggaacttac
cgttgtgaaaaatgtaatgacgagtctgaaaatttcaaatatagattacttcttcaagca
cagctgtgtgatactactagtagtcaatgggtaactatgtttcaagaagcaggagaagga
ttattaggaataaatacatcagaactaggtaaattatatgacaatgacaaagaagaatat
aacaatgttattcataaaaagatattcaagatgtttgaaacaagagtaagagctaaatta
gagacttataataatgaaactagattaaaagtatcagttatgaatatgaagcctgttgat
tacaaacttgcatcttctaaattgataactgatattaaaagacttagtggaatgggtact
tcttcaatgtaa
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