Daktulosphaira vitifoliae (grape phylloxera): 126898485
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Entry
126898485 CDS
T09738
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt04382
Cornified envelope formation
dvt04512
ECM-receptor interaction
dvt04518
Integrin signaling
dvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126898485
04518 Integrin signaling
126898485
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126898485
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126898485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvt04147
]
126898485
00536 Glycosaminoglycan binding proteins [BR:
dvt00536
]
126898485
Exosome [BR:
dvt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126898485
Glycosaminoglycan binding proteins [BR:
dvt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126898485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126898485
NCBI-ProteinID:
XP_050528494
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MPRFRLFHWRVFALFIIYIIASLYLIKSTTAQFNLYSDQNRDQLYNDRYSVFNQRSNSTN
CTPKCYAEKGSRGPPGSPGLPGPPGARGYQGQEGLPGPSGDKGDMGIIGPRGPKGDRGRI
GLPGFPGQNGVPGQPGLPGDPGHNGIDGCNGTEGDTGRDGPPGLPGPRGFPGLPGDKGPK
GEPAYTSINNKGQKGEPGLDGLQGQPGSPGFPGLIGPTGPQGDVGLKGNKGPPGVKGEKG
NMGLGYEGQKGDKGFKGERGPPGPDLYYSLPGNASVVGPQGERGEPGPKGDIGPKGLQGE
PGQIGDPGISGEPGIKGEKGLQGPPGIRGRDGYPGPQGLVGLKGDRGSEGLPGIPGRPGL
KGEPGRDGPAGAMGLRGPPGPPGGGNGRPGPPGPQGPRGYTGPPGPKGLDGVDGFPGPPG
PIGYPGGPGTPGAIGPEGMPGEKGTKGEPGLTGMPGATGPRGYIGIQGPPGPQGFPGEKG
ASIMGPKGFDGINGKDGDKGAKGERGYPGERGSPGDSPTGIVGPQGVMGPPGDKGADGLP
GIPGVPGRDGLKGDIGGRCIGCRPGDKGSKGEAGLYGNPGLMGPRGSPGERGFPGEPGAD
GLNGPPGEIGEPGKDGTPGDQGIPGEKGEPAMVPSNLVTNMKGDTGPRGDRGSDGLPGLS
GSRGPVGPQGIEGNPGLPGEKGDKGFPGHEGIPGQPGNPGAKGEKGVSIKGEQGYLGRPG
IKGEKGEPGFYGEKGEPGRCEVMDLIKGIKGEPGNQGQKGEPGTPGAEGFPGEKGLIGPP
GPTGTPGPRGIPGPVGPRGLPGPRGEKGNTGSMGFPGEPGFGGEKGSPGMPGFKGGKGEP
GISVIGPKGLTGPEGEKGEKGLQGPYGRPGAPGEPGIPGLTGEKGDQGEPGLNGLNGPSG
AKGDPGPIGPPGLQGVDGKPGSDGQKGEPGIVGEPGRQGLQGFPGAKGDTGLPGQEGPKG
FPGNRGYPGTPGKPGMDGIPGSKGDKGDYGLPGNPGLPGDDGLPGLLGERGPKGDIGFPG
PPGPMGLRGLQGFKGAQGPIGYQGPKGEPGPVSEKGQKGEPGESGLRGPPGLSGRNGIPG
EKGDAGYPGIGIQGLPGPQGEPGAPGFSGLSGRDGEKGVPGVPGVQGMKGDTGPRGQPGT
PGPPGLDGVNGIEGIQGLQGFPGVKGDKGDVGYPGRPGFDGLKGERGLPGLTGPIGLPGV
IGEKGDRGLPGPAVDIKGDKGEPGPPGLPGKPGDIGPPGLEGLSGLSGEKGDMGLPGPRG
FTGAPGLRGEKGDIGQPGLPGPIGLTVKGEKGLPGILGKHGRDGAPGLQGEKGDKGIPGL
PGLPGAIGPSGLPGPQGDIGLIGPPGIPGTPGTDGLPGAPGLDGPPGYKGSKGEPGMPAP
YAEKGDKGERGLQGEPGYPGQKGIKGDRGFSGNTGLPGIDGLQGEKGIAGLPGRPGIPGF
TGAKGDKGEPGFIPPPGPKGERGLPGPPGWPGEKGDRGRDGLLGPRGFKGEKGFPGLEGP
IGPPGPGGDKGEPGLEGMPGLQGQPGLPGKDGIPGKPCEFQPDYSTGILLVKHSQSSAIP
ECEANHVKLWDGFSLLYIEGNEKAHNQDLGFAGSCIRKFSTMPFLFCDFNNVCNYASRND
KSYWLSTNAPLPMMPVEEVEIQKYISRCVVCEAPANVIAVHSQALTVPDCPNGWEGLWIG
YSFVMHTAAGAEGGGQSLASPGSCLEDFRATPFIECNGARGTCHYFANKLSFWLATIDPE
EQFTSPQRQTLKKDMTRSRISRCQVCIRRT
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggtttagactgttccactggcgggtattcgctttatttattatctacattatt
gcatcgctttacttaattaaatcgacaactgcacaatttaatttatactcggatcaaaat
agagatcaattatacaacgatagatattctgtattcaatcaaagatcaaattccacaaat
tgtacgccaaaatgttatgcagaaaagggaagcagaggaccgcctggttcaccgggattg
cccggacctcctggagcaagaggttaccaaggacaagaaggtcttcccggaccctcgggt
gataaaggagatatgggaattattggacctcgtggacctaaaggagatcgaggaaggatt
ggtctaccaggttttccaggtcaaaacggagttcctggacaaccaggacttcctggagat
ccaggtcataatggaatagatggatgcaatggaacagaaggagacacaggtcgtgatggg
ccaccaggtttacccggtccacgtggttttccagggttgcctggcgacaaaggtcctaaa
ggagaacctgcttatacatccattaacaataaaggacaaaaaggagaacctggtttagat
gggcttcaaggtcaacccggtagtcctggttttccagggttaattggaccaacaggacct
cagggtgatgttggattaaagggtaataaaggacctcctggagtaaaaggagaaaaggga
aatatgggattagggtacgaaggtcaaaaaggagataaagggtttaaaggagaacgagga
cctcctggaccagatttatactattcattaccaggaaatgcatcagttgttgggcctcaa
ggagaaagaggtgaaccaggacctaagggcgatataggtccaaaaggtcttcaaggagaa
cctggacaaattggtgatccgggaatttcaggcgaacctggtattaaaggagaaaaaggt
ttacaaggaccacccggaataagaggtcgtgatggatatccaggaccacaaggacttgta
ggattaaaaggtgatagaggaagtgaaggcttgcccggaattccaggtcgtccaggatta
aaaggggaaccaggcagagatggtccagcaggtgcaatgggacttcgaggaccacctggc
cccccaggaggtggaaatggcaggccagggccacctggtccccaaggccctcgaggttat
acaggacctccaggacctaaaggtctagatggagtcgatggttttccaggaccacctgga
cctattggttatccaggaggaccaggaactcctggagcaattggacccgaaggaatgcct
ggtgaaaagggaactaaaggcgaaccaggtttaacaggtatgcctggtgcaactggtcca
agaggctatattggaattcaaggaccgccagggcctcaaggttttccgggagaaaaagga
gcatctataatgggacctaaaggatttgatggtattaatggtaaagatggcgataaagga
gcaaaaggagagcgaggttatcctggagaacgcggatcaccaggggattcgccaacaggc
attgtaggaccacaaggtgttatgggaccaccgggtgataaaggagcggatggtcttcct
ggaataccgggtgtcccaggtcgtgatggactgaagggagatattggaggacgttgtatt
ggatgtcgcccaggagacaaaggatctaaaggagaagctggtttatatggaaatcctgga
ttaatgggccctcgcggatctcctggtgaaagaggattccctggtgaaccaggagcagat
ggtttaaatggcccacctggtgaaattggtgaaccgggtaaagatggaactcctggtgat
caaggaatacccggtgaaaaaggagaacctgctatggtgccctctaacttggtaactaat
atgaaaggagatactggtccaagaggtgaccgcggaagtgatggattaccaggattatcc
ggatctcgtggtcctgtaggtccacaaggaatagaaggaaatccagggttacctggtgaa
aaaggagataaaggtttcccaggccacgaaggtattccaggccaacctggtaacccaggc
gcaaagggtgaaaagggtgttagtatcaaaggtgaacaaggatatttgggtagaccaggt
ataaaaggagaaaaaggagagccaggattttatggagaaaaaggagaaccaggtcgttgt
gaggtaatggatctaatcaaaggaataaaaggtgaaccagggaatcaaggacaaaaagga
gaacctggtacaccaggagctgaaggtttccctggagaaaaaggattaattggaccacct
ggacccaccggtacaccaggccctagaggaattccaggtccagtcggtcctagaggactt
ccgggacctcgcggtgaaaaaggaaatacaggttcaatgggtttccctggagaaccagga
tttggaggagaaaagggatcaccaggaatgccaggatttaagggtggcaaaggagaacct
ggaatatcagtcataggacctaaaggattaacggggcctgaaggagaaaagggagaaaaa
ggtttacaaggaccatatggaagaccaggggcaccaggagaaccaggtattcccggtcta
acaggagaaaaaggagatcaaggtgaacccggtctaaatgggttgaatggtccatcagga
gctaaaggagatccaggtccgataggaccacctgggcttcaaggagttgacggaaaacca
ggaagtgatggtcaaaaaggtgaacctggtattgtgggtgaacctggtcgtcaaggatta
caaggttttccaggagctaaaggtgataccggtttaccaggacaagaaggccctaaggga
ttcccaggaaatagaggatatcctggaacgcctggaaagcctggtatggatggtatacca
ggcagcaaaggagacaagggtgattatggattaccaggaaatcctggattaccaggagac
gatggtttacctggtctactgggagaacgaggtccaaaaggagatataggattcccagga
ccacctggtccaatgggtttacgtggtttacaaggatttaaaggagctcagggtcctatc
ggataccagggacctaaaggagaacctggtccagtatctgaaaaaggacaaaagggagaa
cctggtgaatctggtcttagaggacctcccggactttctggtcgaaatggtatccctggt
gaaaaaggtgatgcaggataccctggaataggaattcaaggactaccaggacctcaagga
gaaccaggtgcccctggttttagtggtctgtcgggaagagatggagaaaagggtgtacct
ggagttccaggagtacaaggaatgaagggtgacactggccctagaggccagccaggaaca
ccaggaccacccggacttgacggtgttaatggtattgagggaattcaaggtttacaagga
ttcccaggagttaaaggagataaaggtgatgtcggttatccgggtagacctggatttgat
ggtcttaaaggagaacgaggtttaccaggacttactggaccaattggattgcccggagta
attggagagaaaggtgatcgtggattaccgggccctgctgtagatattaaaggagataaa
ggcgaacctggtccaccaggtttacctggaaaacctggtgatataggtcctccaggtctt
gaaggattatcaggtttgtcaggagagaagggtgatatgggattaccaggaccaagagga
tttactggtgcaccaggtctgagaggagaaaaaggtgatattggtcaacctggtcttcct
ggtccaattggattaaccgtaaaaggagaaaagggattgccaggcatattaggaaaacat
ggtagagacggagcacctggtttacaaggagaaaaaggtgacaaaggaatacctggattg
ccaggattaccaggagctattggaccatcaggcttacctggcccacaaggagatattgga
cttataggaccaccgggaatacccggaacaccaggaacggatggactcccaggagcacca
gggttagatggaccaccaggatataagggctctaaaggagaaccaggaatgccagctccc
tatgctgaaaagggcgataagggtgaacgtggtcttcaaggtgagcctggatatcctggc
caaaaaggaataaaaggagacagagggttctcaggtaatactggattaccaggtatagat
ggcttacaaggagaaaagggtattgctggtttacctggtagaccaggtataccaggattc
accggtgctaaaggagataagggtgaaccgggatttattccaccccccggtcccaaagga
gaaagaggattacccggacctccagggtggccaggagaaaaaggagaccgaggacgagat
ggattattaggacctcgtggatttaagggagaaaaaggttttcctggtttggagggtcct
attggaccaccaggaccaggtggtgataaaggtgaaccgggattagaaggaatgcctggc
ttacaaggacaacctggattgcccggtaaagatggtattcctggcaaaccctgtgaattc
caaccagattattcaactggaattctattggtgaaacacagtcaaagctcagcaatacca
gaatgtgaggcaaaccatgtaaaactatgggatggtttcagtttgttgtacattgaagga
aacgaaaaagcacataatcaagatttaggttttgctggttcttgcatacgtaaattttct
acaatgcctttcctattctgtgatttcaataatgtttgcaattatgctagtagaaatgac
aaatcttattggttaagtaccaatgcaccattaccaatgatgccggttgaagaagttgaa
attcaaaaatatatttcaagatgtgttgtttgcgaagcacctgctaacgtcattgcggtg
cacagtcaagcattgaccgttcctgattgtcccaatggttgggaaggactatggatagga
tacagttttgtcatgcataccgctgctggtgcagaaggaggaggacaatctctagcaagt
ccaggttcttgtctagaagactttagagcaacaccatttattgaatgtaatggagcacgt
ggtacatgccattattttgctaataaattgagtttttggttggcaactatcgatccagaa
gaacaattcactagtccacaaagacaaactttaaagaaagatatgactcgtagtcgcata
agtagatgccaagtttgtattcgacgaacttaa
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integrated database retrieval system
