KEGG   Daktulosphaira vitifoliae (grape phylloxera): 126898723
Entry
126898723         CDS       T09738                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
dvt  Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013  Nucleocytoplasmic transport
dvt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dvt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126898723
  09122 Translation
   03013 Nucleocytoplasmic transport
    126898723
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dvt03019]
    126898723
   03041 Spliceosome [BR:dvt03041]
    126898723
Messenger RNA biogenesis [BR:dvt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126898723
Spliceosome [BR:dvt03041]
 Complex C
  Other components
   EJC/TREX
    126898723
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126898723
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st RMC1_N Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Tricorn_2nd Beta-prop_HPS5 DSE1_N Beta-prop_NOL10_N eIF2A Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 WD40_RFWD3 PAC11 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 PD40 TRM82_WD Beta-prop_TEP1_C Peptidase_S9_N Beta-prop_EIPR1 Cytochrom_D1 DPPIV_N Beta-prop_DCAF12 Beta-prop_ELP1_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP Tricorn_N Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 126898723
NCBI-ProteinID: XP_050528982
LinkDB
Position
Unknown
AA seq 325 aa
MSYWKNFSVDANELKDYFKTHKAVKEFQAHSSKVHSVGWSCDGKRLASCSFDKSVATFTV
DKDRLNKEYTYKGHGGSVDQLCWHKSNPDLLSTASGDKSVKIWDVRHQKCSNTIPTKGEN
INITWSPDGNTIAVGNKEDLITFIDMRTLHTINEQQFNFEVNEMSWNNESDLFFLTNGLG
YVYVLSFPDLVQHHIVKAHPGTCICIEFAPNGQYFAVGSADASVSLWDLENLACIQTYNR
LDWPVRAISFSYDGKMLASGSEDLYVDIADVTTGEKITDVPIEAATFTVAWHPKQYLLAF
ACDDKEQFDRKRDTGNLKVFGFNSE
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagttattggaaaaatttttccgttgatgcaaacgaactgaaagattactttaaaaca
cataaagcggttaaagagtttcaagctcattcatcaaaagtgcattcagtcggctggagc
tgtgacggaaaacgtttagcatcttgttcttttgataagtctgttgctacgtttactgtt
gacaaagaccgattgaacaaagaatatacttataaaggtcatggtggtagtgttgatcag
ttatgttggcataaatctaatccagacttattaagtacagcaagtggtgataaatcagtg
aaaatttgggatgttagacatcaaaaatgttcaaatactattcctacaaagggagaaaat
attaacataacatggtcacctgatggtaatacaattgctgttggcaataaagaagattta
attacctttattgatatgcgtacattacatacgattaatgagcaacagttcaattttgaa
gttaatgaaatgtcatggaataatgaaagcgatttattctttctaactaatggtttaggt
tatgtttatgtgttaagctttccagacttagtacagcatcatattgttaaagcccatcct
ggaacttgtatttgtattgaatttgctccaaatggccaatattttgcggttggttctgca
gatgcatctgtatcattatgggatttggaaaatttagcatgtattcaaacgtataatagg
ttggattggccagtacgtgcaattagtttttcatatgatgggaaaatgttagcttcaggt
agtgaagatttatacgttgacattgctgatgtaactactggggaaaaaataactgatgta
cctattgaagctgcaacattcacagttgcatggcatcctaaacaatatttactagcattt
gcatgtgatgacaaagagcaatttgatagaaaaagagacactggtaatttaaaagtgttt
ggtttcaattccgaataa

DBGET integrated database retrieval system