Daktulosphaira vitifoliae (grape phylloxera): 126899003
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Entry
126899003 CDS
T09738
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126899003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvt03021
]
126899003
03036 Chromosome and associated proteins [BR:
dvt03036
]
126899003
Transcription machinery [BR:
dvt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126899003
Coactivators
SAGA/TFTC/STAGA complex
126899003
Chromosome and associated proteins [BR:
dvt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126899003
STAGA complex
126899003
TFTC complex
126899003
SAGA complex
126899003
SLIK complex
126899003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_SPT8
DUF7226
WDR54
Motif
Other DBs
NCBI-GeneID:
126899003
NCBI-ProteinID:
XP_050529419
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MMEENIKQEVKPVIEGISKEPDEKKTNLCVALKILKKYNLNITAETLKKEANLTDVAYNT
SELDVNNALNVYKSQGDPSVYENAYLTLSKFVETSLDIYKHELGCVLYPVFVHMYLDLIC
NGYEAEAVKFIKKFGPGQESYYQNDIKNLAVITKKEELNDNTLVSNYKSNEFVVRMSRDT
LSLLKRHLKEKKQTVLLDIVQENLFFDVYEGIARNKQQIDAVAGGMIGEGTRQDNKSRVY
YGLMKEPDLQITAAAVNMDEDEEDAQESEKPKKKKSKSNPLLSKKTKIDPNAPPLDRMAL
PQLREIDKKMKIQAVLDSAKRVALSPETLPSICCYTLLNCSNAINCATISDDATMLAVGL
ANSRIRVWSLVPQKLRAMKTAEQLQDIDLEADDVMHRILDDRSAESMRTLLGHYGPVYQV
SFSPDKTLLLSCSEDCTIRLWSLLLWSCLVAYKGSYHPVWDVRFSPHGYYFATASRDRTA
RLWATDSYQSLRLFSGHFSDVDCCQFHPNSNYIATGSSDRTVRLWDCVTGEQVRLMTGHK
GEILTLCFSNEGRVLASAGNDCNVLLWDIAHGHLLAMLTGHKEPIYTITFSRDSTILSSG
SHDCKIMLWDYSKILEDLSLDDMNVHNPNVINDSNKYLLRAFGTKNSPVVHLFFSRRNIM
FCVCAFNSQHNHHLPLNS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaaaatattaagcaagaagttaaaccagtaattgaaggaatttcaaaggaa
cccgatgaaaaaaaaacaaatttgtgtgtagctttaaaaattctaaagaaatataattta
aatataacagcagagacactgaaaaaagaagctaatttaacggatgttgcttataacact
tctgaactggatgtaaataatgctctcaatgtatataaatctcaaggtgatccatctgtc
tacgaaaacgcgtacttgacattatcaaaatttgtagaaacttccttagatatttataaa
catgaattaggatgcgttttgtatcctgtatttgttcacatgtatttagatctgatttgt
aatggctatgaagctgaagcagtcaaatttataaaaaaatttggtccaggacaagaatca
tattatcaaaatgatataaagaatttagcagttattacaaaaaaagaggaattgaatgat
aatactttagtcagtaattacaagtctaatgaatttgttgtcagaatgtctagagatact
ttatctcttttgaaacgtcatttaaaagagaaaaaacaaacagttcttttagatattgta
caagaaaatttattctttgatgtatatgaaggaatagctagaaataaacaacaaatagat
gcagttgcaggaggaatgattggtgaaggaacacgacaggataacaaatctagagtttac
tatggtttaatgaaagaaccagatttgcaaattactgcagctgcagtgaatatggatgaa
gatgaagaagacgcacaagagagtgaaaaacctaagaaaaaaaaatctaaaagtaatcct
ttactatctaaaaaaaccaaaattgatccaaatgcaccacctttagatagaatggcttta
ccccaattaagagagattgacaaaaaaatgaagatacaggctgttttagattctgctaaa
agggttgctttaagccctgaaacattgccatctatttgttgttatacattattaaattgt
tccaatgctatcaattgtgcaacaatcagtgatgatgctacaatgttagctgtaggttta
gctaatagtagaatacgtgtatggagtttagttccacagaaattgagggcaatgaagaca
gctgaacagcttcaagatattgaccttgaagcagatgatgtaatgcacagaattttagat
gatagatcagcagaaagtatgcgaacattacttggtcactatggacctgtatatcaagta
tcatttagccctgataaaactttattgttatcatgttcagaagactgcactataaggtta
tggagtttattattatggtcatgtctcgtagcttataaaggtagttatcatcctgtttgg
gatgtaagatttagtccacatggttattattttgcaactgccagtagagatcgtactgca
agactatgggcaactgatagttatcaatcattaagactatttagtggacatttttctgat
gttgactgttgtcagtttcatcctaactcaaattatattgcaactggttcaagtgatcga
acagtaaggttatgggattgtgtaactggtgaacaggtacgattgatgactggacataaa
ggagaaatacttactttatgtttttctaatgagggtcgtgttttagcttcagctggcaac
gactgtaatgttcttttatgggatattgcccatggacaccttttagcaatgttaacgggt
cacaaagagcctatttatacaataacatttagtagagacagtactattttatcttcagga
tctcatgactgtaaaataatgctatgggattattcaaaaattttagaagatctatcatta
gatgatatgaatgtgcataacccaaatgttataaatgatagtaataaatatttactaaga
gcatttggtacaaaaaattctccagtagttcatttatttttttctagacgaaatattatg
ttttgtgtttgtgcattcaattctcaacataatcaccatttaccattaaattcttag
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