Daktulosphaira vitifoliae (grape phylloxera): 126900418
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Entry
126900418 CDS
T09738
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126900418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvt03041
]
126900418
03009 Ribosome biogenesis [BR:
dvt03009
]
126900418
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126900418
Spliceosome [BR:
dvt03041
]
Complex A
U1 snRNP components
U1 related factors
126900418
Complex B
126900418
Ribosome biogenesis [BR:
dvt03009
]
Eukaryotic type
Pre-60S particles
Helicases
126900418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_30
Cas3-like_C_2
Imm64
Motif
Other DBs
NCBI-GeneID:
126900418
NCBI-ProteinID:
XP_050532067
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MFAQGLRCVKSAILNPINCSSTLKGISSSQLFLKNISIMSYARNGRGNSSYGGGGGRGGG
QRYGGGRMGGDKKNPGANLQTPNWDRVQLRPFKKEFYVPHPTIDRRSYEEVDKYRTSKDI
TVMSSDRTEVPYPIQHFKEANFPDYVMQVLVNEGFSEPTPIQAQGWPIAMSGKNMVGVAQ
TGSGKTLAYTLPAVVHINNQEPLKKGDGPIALVLAPTRELAQQIQKVAALFNQSTYLRST
CIYGGAPKSHQARDLHNGVEIAIATPGRLLDFLESNATNLQRCTYLVLDEADRMLDMGFE
PQIRKIIQQIRPDRQVLMWSATWPKEVQKLANDFLSDYIQLNVGSLTLSANHNIQQNVDV
VQEHEKEDKLMDLLQDISNMDENKTIIFAETKRKVDTITRKIVNMGARAVGIHGDKSQSE
RDHVLKQFRNGRANILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSSQKG
TSYAFFTHSNSKQAKDLVAVLTEANQRIDPKLAAMAARSYSNGGNKWYGGGGNRWGGGRP
AHRKF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcaaggtttacgttgtgttaaatccgccatattgaacccaatcaattgttca
tcaacattgaaaggcatttcatcatctcagttgttcttaaaaaacatttcaattatgtct
tatgcaagaaatggtagaggtaatagttcttatggaggcggtggtggaagaggaggcggt
cagcgatatggtggtggtagaatgggaggtgataagaaaaatcctggtgcaaatctgcaa
acccctaattgggaccgtgttcaattacgacctttcaaaaaagaattttatgttccccat
cctactattgatcgaagatcttatgaggaagtagataaataccgtactagtaaggacatc
acagtgatgagttctgatagaactgaagttccatatccaattcaacattttaaagaagcc
aatttcccagattatgtaatgcaagttttagttaatgaaggttttagtgagccaacacca
atccaagctcaaggttggcctatagctatgagtggtaaaaatatggttggagttgcacaa
actggatcaggcaaaacattagcttatactttgcctgctgttgttcatattaacaatcaa
gagcccttaaaaaagggtgatggtccaattgcacttgtgttagctccaacaagagaattg
gctcaacaaattcagaaagttgctgctcttttcaaccaatccacatatttacgatccact
tgtatatatggtggtgcacctaaatctcatcaggctagagatttacataatggtgttgaa
attgctatagcaacaccaggccgtctacttgattttttggaatcaaatgctactaacttg
caacgttgtacttatcttgtcttggatgaagcagatcgtatgttagatatgggttttgaa
ccacaaataaggaaaatcattcaacaaattagacctgatagacaagtgttgatgtggtct
gctacatggccaaaagaagtccaaaaattggccaatgacttcttaagtgactacattcag
cttaatgtaggatctttaacattatctgccaatcataatattcaacaaaatgttgatgtc
gttcaagaacatgaaaaagaagataaacttatggatctattacaagacataagtaacatg
gatgaaaataaaaccataatttttgctgaaactaaacgaaaagttgatacaattacccgt
aaaattgttaatatgggtgctagagctgttggtattcatggagataaatcacaatctgaa
agagatcatgtattaaaacaatttagaaatggaagagcaaatattttagtagcaactgat
gttgctgctagaggtttagatgtagatgatgtaaaatttgttattaattttgactatccc
aataattcagaagattacattcaccgaattggtcgaactggtagatcgtctcaaaaaggt
acatcatacgcctttttcactcattccaatagcaagcaagctaaagatttagttgctgta
ctcactgaagctaatcagagaattgatcctaaattagctgctatggctgcaagatcttat
tccaatggtggtaataaatggtatggtggtggtgggaaccgttggggaggtggccgtcca
gcacacagaaaattttaa
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