Daktulosphaira vitifoliae (grape phylloxera): 126900924
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Entry
126900924 CDS
T09738
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03030
DNA replication
dvt03410
Base excision repair
dvt03420
Nucleotide excision repair
dvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126900924
03410 Base excision repair
126900924
03420 Nucleotide excision repair
126900924
03430 Mismatch repair
126900924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvt03032
]
126900924
03400 DNA repair and recombination proteins [BR:
dvt03400
]
126900924
DNA replication proteins [BR:
dvt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126900924
DNA repair and recombination proteins [BR:
dvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126900924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_14
AAA_22
RuvB_N
AAA_17
RCF1-5-like_lid
nSTAND3
AAA_5
AAA_18
Zeta_toxin
AAA_7
NTPase_1
AAA_30
AAA_assoc_2
AAA_33
AAA_16
AAA_19
DUF2121
Motif
Other DBs
NCBI-GeneID:
126900924
NCBI-ProteinID:
XP_050532916
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MVTLGFHKIRFDIRSFFMKDARNNPSTKEKVDITKDQKKKSRKRHVLSSDEEDEIVPTSN
NCNLNKHTEKSLKLEDIFGNEPVKQTSSKMVNQLQNESKSNGNVLNAEITTKVNELLLSH
SKSPMTKELQISPQKLKSSSVSQNLKEHQINIDSKSDKIVSSNKIKSPTLDSCSHVKSNS
KRKISPLTTPENKKFKHGGLNSDSQESGYGTDSVQSSSSSVSSNIPESVETKLWVDKYKP
ISLKQIIGQTGDKSNVNKLLKWLKVWYTNHGVGVTKKLTRPSPWAKDDDGSFFKAALLSG
SPGVGKTTTAHLVCKELGFDIVEFNASDTRSKKQLQNNVSELLSSTSLSPYLGGKSVTKK
HALLMDEVDGMAGNEDRGGVQELVLLIKNSKCPIICMCNDRNHPKIRTLANYCFDLRFHK
PRLEQIKASMMSVCFKEKLKISPEILSSIIASTDNDIRLTLNHLSIIAAGKDNLNINKKY
VKMGPWDVVRKVFSSEEHKTMSINDKCDLFFYDYNISPLFVQENYLSVIPHDVEGPKWKK
FERYSLAADSISYGDIVSAKIRSSNNWSLLPAQAIFCSYCPGEFLKGHISKQINFPAWLG
KFSKGNKMNRLLQEVQIHTRIRLSASKEAINLDYLTTLRNSILRPLQEKLTDGVQEALDF
MQYYQLSKEDLESLNELTTWPGSKDPMSDIPAKVKSAFTRAYNKSCVTFHASRKKKATIT
DDQEGLLDDEDTIEIVSEEEDDDIQNDTMISIKKKPTKKGSSSPPTSKTQGTSKGRSGGA
GRKKK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggtgacacttggatttcacaaaatacgtttcgatattagatcattctttatgaaagat
gcaagaaataatccaagtaccaaagaaaaagtagatattacaaaagatcaaaagaaaaaa
agtagaaaacgtcatgttttatccagtgacgaagaagatgaaatagttcctacttcaaat
aattgcaatttgaataaacatactgaaaaaagtcttaaattagaagacatatttgggaat
gagccagttaaacaaacatcttccaaaatggtaaatcaattgcaaaatgaaagcaaatct
aatggtaatgtgttaaatgcggaaattactacaaaagtaaatgaacttctattatcccat
tcaaagtctccaatgacaaaagaacttcaaatttcacctcagaaattaaaatcctcatca
gtgtcacaaaatttaaaagaacaccaaataaacattgattctaaaagtgataaaatagta
tcgtccaataaaatcaaatcacctacacttgattcatgtagccatgtcaaatctaattca
aaaagaaaaatttctccattaactacacctgaaaacaaaaagtttaaacacggaggtctg
aattcagattctcaagaaagtggatatggtactgattctgtacaatcatcaagtagtagt
gtatcttctaatatacctgaatcagttgaaactaaactttgggtagataagtataaacct
atatcattaaaacaaattattggtcaaactggagataaaagtaatgtcaataaattactc
aagtggttaaaagtctggtatactaatcatggcgtaggtgttacaaaaaaactaactaga
ccgagtccttgggctaaagatgatgatggttcatttttcaaagcagctttactctctggt
tcaccgggtgttgggaaaactactacagcacatttagtatgcaaagaattaggttttgac
attgttgagtttaatgcttccgatactcgttccaaaaaacagttgcaaaataatgtatct
gagcttttatcttctacttcattgagcccttatttgggagggaaatcagtaactaagaaa
catgcacttttaatggatgaagttgatggcatggctggtaatgaagatagaggtggtgtt
caagaactagtattattaataaaaaattctaaatgtcctatcatatgtatgtgtaatgat
cgaaatcacccgaaaattcgaactttagccaactattgcttcgatttaagatttcataaa
ccaagacttgaacaaattaaggcatctatgatgtctgtttgctttaaggaaaaattaaaa
atttctccagaaatattgtcatcaattatagcgagtaccgacaatgatatcaggcttact
cttaatcatttgtcaattattgcagctggaaaagataatttaaatattaacaaaaaatat
gtaaaaatgggtccatgggatgtagtaagaaaagttttttcttctgaagaacacaaaact
atgagtattaatgacaaatgtgatttatttttttatgattacaacatttctccattattt
gttcaagagaactacttgtctgtgataccacatgatgtcgaaggaccaaaatggaagaaa
tttgaaagatattcattagctgctgatagtattagttatggtgacatagttagtgctaaa
ataagatcttccaataattggagtttacttccagctcaagcaattttttgtagttattgt
cctggtgaatttttaaaaggtcatataagtaaacaaataaatttccccgcatggttagga
aagttttcaaaaggaaataaaatgaataggttattgcaagaagtacaaattcatacaaga
ataaggttgtctgctagcaaagaagcaataaaccttgactacctaactacattaagaaat
tcaattcttagacctcttcaagaaaaattaacagatggtgttcaggaagctcttgatttt
atgcagtactaccaactatcaaaagaagacttagaatcattaaatgaattgactacatgg
ccaggttctaaagatccaatgtcagacattcctgcaaaagtaaaaagtgcttttaccaga
gcatacaataaatcttgtgtaactttccatgctagcagaaaaaaaaaagcaacaatcaca
gatgatcaggaaggtttattagatgatgaagatactatagaaatagtaagcgaggaagaa
gatgatgatattcaaaatgacacaatgatttcaataaaaaagaagcctaccaaaaaaggt
tcttcatcaccaccaacatcaaaaacccaaggaacaagtaaaggaagaagtggaggtgct
ggaaggaaaaaaaagtag
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