Daktulosphaira vitifoliae (grape phylloxera): 126901354
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Entry
126901354 CDS
T09738
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126901354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvt03021
]
126901354
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126901354
Transcription machinery [BR:
dvt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126901354
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126901354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_4
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
126901354
NCBI-ProteinID:
XP_050533717
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MELLVAGFDDIKFNVEIALDEQHGALPLPFNGMDKSIAAVCSFYPKGACAKGALCPMRHV
RGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPESK
LKDCPWYDRGFCRHGPHCKHKHVRRVLCMNYVAGFCPDGLNCKFVHPRFELPAYQQHDAN
QKDAKKLVVICHFCGDTGHKAMYCHKMVSDLVKIKPELENNDQPQVNNQPGFQRKLKPLE
EVTCYKCGFKGHYANKCPKGHLAFLSLQQNQAIQNNNQGV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagttattagtagctggatttgacgacattaaatttaatgttgaaatagctttagat
gaacagcatggcgctttgccattaccatttaacggaatggacaaatcaatcgcagctgtt
tgttcattttaccctaaaggtgcatgtgcaaaaggtgcattgtgtccaatgagacatgta
cgtggagatcgaactgttgtttgtaaacattggttacgaggtttatgtaaaaaaggtgat
caatgtgaatttttacatgaatatgatatgacaaaaatgccagaatgttatttttatgct
cgattcaatgcatgtcataataaagaatgcccatttttacatattgatccagaaagtaaa
ctaaaagactgtccctggtatgatcgtggattttgtcgtcatggtccacattgtaaacat
aaacatgtacgtcgtgttttatgtatgaactatgttgcaggtttttgtcctgatggtctt
aattgtaaatttgttcatccaagatttgagttgcctgcctatcaacaacatgatgcaaat
caaaaagatgctaaaaaacttgttgtaatttgtcatttttgtggtgatactggtcataaa
gccatgtattgccataaaatggtatcagacttagtaaaaattaaaccagagttggaaaat
aatgatcaaccacaggtcaataatcaaccaggatttcaaagaaaattaaaacccttagaa
gaagttacttgctataaatgtgggttcaaaggtcattatgctaataaatgtcctaaaggt
catttagcctttttgtcattacaacaaaaccaagccattcaaaataataaccaaggtgta
tga
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