Daktulosphaira vitifoliae (grape phylloxera): 126901791
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Entry
126901791 CDS
T09738
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126901791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvt03009
]
126901791
Ribosome biogenesis [BR:
dvt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126901791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WDR55
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_TEP1_2nd
Tricorn_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR75_1st
Beta-prop_ELP1_2nd
WD40_Gbeta
PD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
126901791
NCBI-ProteinID:
XP_050534507
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MKLVPENVITVIKNQKMGSFDVHKVNFFSPELLSVKCMSIESDTNKLAIGRSNASIEVWD
VSYKPHIDRILMCDSSIDGLEWHKGRLFSCSANGTVTEHDLQSLSPMYYKTVTSGSCWCI
AIHKNSERLAAGTQDGYINIFEITPDGLTYDRLMDKQEGRISCISWDITGEWLVTGSVNA
LRIYSRRNGHAVHKLPTGQSETVVSSLVVANDFTIISADSRGKLCFWDGYKGINIANHQA
LKTNALTLCLDESQAKVYCSGVDPTIVCYEKITMKSDSNIDCGKWVRSVNLSAHRVEVKS
LIHFKGKLYSGGIDGYLAVSSYPPKLLVKYPPLMPSSVSLATDARYVMLKYLSHLDIWHL
GDKHKYENKLSKLVTIKYSKNDFIRCATISPDGTWIVYSTEEKLKIFSLIMDIVTSEPMI
KKTDIQPVECDVSTQLAFSSDSKYLWFATKHENTLVCLEMSHKFDLLTKYCIDTSPYIKD
LVHLLEVSKSNKYIVIGDRLNNIIVFSEGLHYCTLPKYHCPPTSLKIHPTTENLVIAYAD
RNVFEYNINKKEYTQFSENLLLTPPSDLLNRPFPINFIAFDESRSDAVILSDDNTICVVT
NDNKSTPDKSTSKIKKRESENKKISVKILQNYEHLVFFDFLNNEELVAIEVNPCTLVEKL
PFVYKKKIFGMS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagtacctgaaaatgttataactgtaattaaaaaccagaagatgggttcattt
gacgtacacaaagtgaattttttttcaccggaacttctgtctgtaaagtgcatgtccatt
gaaagtgacactaacaaattggctattggaagatcaaacgcatcaattgaagtatgggat
gtatcttataaacctcatattgatagaatacttatgtgtgatagcagcatagatgggcta
gaatggcataagggaagattgttcagttgtagcgctaatggtacagttactgagcatgat
cttcaaagtctttctcctatgtattacaagactgtgacttctgggtcatgttggtgtata
gcaattcataaaaatagtgaacgtctagctgcagggacgcaagatggatatataaacata
tttgaaataacccctgatggattaacttatgatagactaatggacaaacaagaaggtcgt
attagttgtatttcatgggatattactggtgaatggcttgttactggatcagtaaatgca
ttacgaatctatagtcgtcgaaatggtcatgcagtccataaattaccaacgggacaatca
gaaactgttgtctcctcattagttgttgctaatgattttacaataataagtgcagattca
cgtgggaagttatgtttctgggatggatataaaggaataaatattgcaaatcatcaagct
ttaaaaacaaatgctttaacattgtgcttagacgaatcacaagcaaaagtttattgtagt
ggtgttgatcccactattgtatgttatgaaaaaattactatgaagtcagatagtaatata
gattgtggcaaatgggttagaagtgtgaatctttccgcacacagagttgaagtgaaatcg
ttgattcattttaaaggcaaactatattctgggggtattgatggatacttagctgttagt
agttacccaccaaaattgttagtgaaatatcctccattaatgccttcttctgtatcgtta
gcaactgatgctcgttatgtaatgctgaagtatctaagtcacttagatatatggcactta
ggtgataaacataaatatgaaaataaattatcaaaattagtaactattaagtattcaaaa
aatgatttcataagatgtgcaactatttcaccagatggtacttggattgtatattcaaca
gaagaaaaattaaaaatattcagtttaataatggatattgtaactagtgaaccaatgatt
aaaaaaacagatattcaaccagttgagtgtgatgtttctacacaactagctttttcgtca
gatagcaaatacttatggtttgctactaaacatgaaaatactttagtatgtttagaaatg
tctcataaatttgacttattaactaaatattgcattgatactagtccatatattaaagat
ctagttcatttacttgaagtctctaaatcaaataaatatattgtaattggagatagacta
aataatattatagtatttagcgaaggattacattattgtacacttcctaagtatcattgt
cctccaaccagtctaaaaatacatcctaccactgaaaatcttgtaatagcctatgcagat
cgtaatgtttttgaatacaatataaacaaaaaggaatatactcaattttcagaaaattta
ttattaactcctccaagtgacttattaaacaggccatttcccattaattttatagcattt
gatgagtctagaagtgatgctgttatactttctgatgacaatactatttgtgttgtcaca
aatgataataagtcaactccagataagtcaacaagtaaaataaagaaaagagaatcagaa
aataaaaaaatctctgtaaaaatactacagaattatgagcatttggtgttttttgacttt
ttaaacaatgaagaacttgtagcaattgaagttaatccatgtactcttgtagaaaagtta
ccatttgtttacaaaaaaaaaatatttggaatgtcatga
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