Daktulosphaira vitifoliae (grape phylloxera): 126901800
Help
Entry
126901800 CDS
T09738
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126901800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvt03041
]
126901800
03009 Ribosome biogenesis [BR:
dvt03009
]
126901800
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126901800
Spliceosome [BR:
dvt03041
]
Complex A
U1 snRNP components
U1 related factors
126901800
Complex B
126901800
Ribosome biogenesis [BR:
dvt03009
]
Eukaryotic type
Pre-60S particles
Helicases
126901800
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5335
DUF6505
HTH_60
Motif
Other DBs
NCBI-GeneID:
126901800
NCBI-ProteinID:
XP_050534523
EnsemblRapid:
LOC126901800
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MAYNRNPVMATRDRRRDRTRRSRSPVRRRGGGRGGRSEPGSNLRKPKWDLKKLEPFKKDF
YIPNKTVYNRSKIEIEKYYEEKEITLKGENIPKPIFKFEESGFPEIILKELRNQGFVEPT
AIQGQGWPIALSGNNLVGIASTGSGKTLSYIIPALIHISHQRTLSRGDGPIVLVLSPTRE
LAQQIQTVCDDFGNAFGVNSTCLFGGAPKSGQAADLSRGVELIIATPGRLLDFLEQDRTN
MCRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQVLMWSATWPKEVRNLAEEFLDNYI
QINIGSLSLAANHNIQQVVDVCQEYEKETKLISLLKKIMDEEENKTIVFIETKRRVDEIT
RKIKRYGYAAVCIHGDKSQYERDNVLKDFRDSRYPILVATDVAARGLDVEDVKFVINFDY
PNNSEDYVHRIGRTGRSHKTGTAYTFFTHSNAKQASDLVAVLTEANQTINPKLREMAENW
RSNGTSGRGDRKRGWRNGRSKNSKSRSRSCERYRRRSMSKSRSYSRSRSRSYERHRRHRR
RKVQIEDITTVYKKINSLL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgtataatagaaatccagttatggcaacacgagatcgaagaagagatcggactcga
cgtagtcgtagcccagtacgtaggcgtggtggaggtcgaggaggacgtagtgaaccagga
tctaatttacgtaaacctaaatgggatttgaaaaaattggaaccattcaaaaaagacttt
tatatacctaataaaactgtttacaacagatctaaaattgaaatagaaaagtattatgaa
gaaaaagaaattaccttaaagggtgaaaatattccaaaaccaatatttaagtttgaagag
agtggttttccagaaatcattcttaaagaattaaggaatcaaggttttgttgaacctact
gcaattcagggccaaggttggcctattgccttatctggtaacaatttggttggtatagct
tcaacaggatctgggaagactttatcatatataatacctgcattaattcatatttcacat
caaagaactttatctcgtggtgatggtccaattgtattagttttatctcctacacgagag
cttgcacaacaaatccaaactgtttgtgatgattttggtaatgcatttggtgttaatagt
acatgtttatttggaggagctccaaaaagcggacaagcagctgatttaagtcgtggtgta
gagttaattattgcaactccaggacgtttacttgattttcttgagcaagatcgcacaaat
atgtgtagatgtacatatcttgttttggatgaggctgatagaatgttagatatgggtttt
gagccacaaattagaaaaattatagatcaaataagacctgatagacaagtattaatgtgg
tctgcaacatggcctaaagaagtaagaaatttggcagaagaatttttagataactacatt
caaattaatattggttcattatcattagcagctaaccataacattcaacaagtagttgat
gtttgtcaagagtatgaaaaagaaacaaaattaatttctctattaaaaaaaataatggac
gaagaggaaaataaaacaattgtttttattgaaactaaaagacgtgtagatgaaataacc
cgaaaaattaaaagatacgggtatgcagctgtttgtatacatggagataaatcacaatat
gaaagagataatgttctgaaagattttagagacagtcgttatcctatattagttgctact
gatgttgctgctcgtggactagatgttgaagatgttaaatttgttattaattttgactat
ccaaataattctgaagactatgttcatcgaattggacgtacaggtcgatctcacaagaca
ggaacagcttacacgttctttacacactctaatgctaaacaggcatctgacctagtagca
gttcttactgaagctaatcaaactatcaacccaaagttgagggagatggctgaaaattgg
cgctctaatggaacttctgggagaggtgatagaaaacgtggttggagaaatggtagatct
aaaaattctaaaagtcgttcaagaagttgtgaacgctacagacgaagatcaatgtcaaaa
tcaaggtcttattctcgaagtcgctccagatcatatgagagacatcgtagacatagaaga
cgcaaagttcaaattgaagatattacaactgtctataaaaaaattaactcattattataa
DBGET
integrated database retrieval system
