Daktulosphaira vitifoliae (grape phylloxera): 126902370
Help
Entry
126902370 CDS
T09738
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126902370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126902370
03009 Ribosome biogenesis [BR:
dvt03009
]
126902370
03036 Chromosome and associated proteins [BR:
dvt03036
]
126902370
Enzymes [BR:
dvt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
126902370
Messenger RNA biogenesis [BR:
dvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
126902370
Ribosome biogenesis [BR:
dvt03009
]
Eukaryotic type
90S particles
RNase
126902370
Prokaryotic type
rRNA processing factors
126902370
Chromosome and associated proteins [BR:
dvt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
126902370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
126902370
NCBI-ProteinID:
XP_050535503
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MNGEIPPINHNLPVGQDSYQPYYSYQQHLSPYTYPQNTYDEISSLQQTQSNNMNIYSNRS
LSYNNGYAVQSNISYINGCPPTPRNLTNCEFNMNGLVQPSSVVCFNTSQTPQNSYNNDYI
NNGLVQNLVSDNTNLTLKRNFSQINVDTQFNNKYSSIPHSLNHQSNVYNKLQPDIFRENV
NHRHSIKEKPQEVDEWFDLTKKFLSSKLDTSIGKRSCESNHNHTDSKYRSHPHLSKHHSF
NKSKRKGMKTAEELSADLEKLSKMTIDQIISAEKIIWTRSAPADLYYEKPEDNPKITVAR
DNVLKLCDEFDAILGKRASAINALKPIYSKPRKSNVKIHKHKCSGNNCSEDDSSSCNEND
EDDEDSTMKELDRKSAHPDRLHPELWYNEWGEMNDGPMCKCSVKSQRSGIRHNIYVGEGP
FEPCSPYSNNSNKLYHYRITITPPTNFLLKCPTIITHDNQDFIFEGFSILSHYPISTLPT
CKVIRFNTNYAILYVEEKIPDNFIIKELQLFYDYLFKDILELVDLDLHAVENKNGCPQFH
FMPRFVRDLPGNGKEILSMNEVLKYLLNNNKLLFEEHSLPELKNMSMYEWQNIVDEYKGM
VVTNPGSKPCSIRVDQLDRDAVNETNEKNCNDGYPVIVHFGIRPPQLSYAGNPDYQKGWR
DYVKFRHLLANMPKPSFEDKRKLEIKERALQEMRSHNKMKRGVTAAVSSKGFYKTGLMCD
IVQHAMLLPVLVCHFRFHKSLEYLEKTLEYKFKNKYLLQLALTHPSYRENFGTNPDHARN
TLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFGKKSEMESNIMHNERLEFLGDAV
VEFVSSIHLFNMFPDIEEGGLATFRAAIVQNQHLAVLAKTLKLDDFMLYAHGSDLCHDSE
LKHAMANCFEALMGALFLDGGIDVADRVFGKTFFHDSPELLDIWVNYPKHPLQQQEPNGD
RKWIKTLPLLQKLTKFEDSIGIKFNHIRLLARAFTDRSVGFTNLTLGSNQRLEFLGDTVL
QLIASDYLYKYFPEHHEGHLSLLRSSLVNNRTQSVVCDDLGMVNYALYANPKAELKTKDR
ADLLEAFLGALYIDKGLKHCQAFCNVCFFPRLHDFILKQDWNDPKSKLQQCCLTLRSVDG
GEPDIPVYKVIECMGPTNGRKYTVAVYFKGVRLSQATGHSIQRAEMNAANSALEVSKDLF
PQLDHQRRAISRSLRHQCKSSDGQTNIDDIIKILESKSLKNETKMSKLDWAKRKLQRKLL
AVLCSNKIEDNEETDEPKKKKQKKN
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaataccacctatcaatcacaatttgccagtggggcaagattcataccag
ccttattatagttaccaacaacatctttctccctatacatatcctcaaaatacctatgat
gaaataagtagcttacagcaaactcaatctaacaatatgaatatttacagtaacagatca
ctatcatataataatgggtatgctgttcaatctaatatttcttatattaatggatgcccg
cctacacctagaaatttaacaaattgtgaattcaacatgaatggcttagttcaaccatca
tctgttgtttgttttaatacatctcaaacccctcaaaattcttataataatgattatata
aataacggtttagttcaaaatttagtttctgataatactaatttaacattaaaaaggaat
tttagtcagataaatgtagatactcaatttaataataaatattcatctattccgcattca
cttaatcatcagtcaaatgtttacaataaattacaaccagatatttttagagaaaatgtt
aatcatagacattctattaaagagaaaccacaagaagttgatgagtggtttgatttaacc
aaaaaatttttgagttctaagttagatacttctattggaaaacgttcatgtgaatctaat
cacaatcatactgattccaaatacaggagccatcctcatctttcaaagcatcattcattt
aacaaaagtaaacgtaaaggtatgaagactgcagaagaattatcagcagatttagaaaaa
ttatcaaaaatgactatagatcaaataattagtgctgaaaaaataatttggactcgttca
gcaccagccgatttatattatgaaaaacctgaagataatcctaaaattactgtggctaga
gataatgttttaaaattatgtgatgaatttgatgctattttaggcaaacgtgcttctgct
ataaatgctttgaaacctatttacagtaaaccaagaaagagtaatgtcaaaattcataaa
cacaaatgctcaggtaataattgttcggaagatgattctagttcttgtaatgaaaatgat
gaagatgatgaagattctactatgaaagaattagataggaaaagtgctcatcctgataga
cttcatcctgaattatggtacaatgaatggggagaaatgaatgacggaccaatgtgtaag
tgtagtgtcaagtctcaaagatctggtattcgacataacatttatgttggagaaggacct
tttgaaccttgttctccttactccaataattccaataaactttatcattatagaatcact
ataacaccaccaactaattttttacttaaatgtccaacaattataacacatgataaccaa
gattttatttttgaaggattttcaatactatcacattatcctatttcaacattaccaact
tgcaaagttattcgtttcaatacaaattatgcaattttatatgttgaagaaaaaatccct
gataattttatcataaaagaattgcaattattttatgattatttatttaaagatatttta
gaattagttgatttagatttgcatgctgttgaaaataaaaatggctgtcctcaattccat
tttatgcctcgttttgttcgagatcttcctggaaatggaaaagaaatactatcaatgaat
gaagttttaaaataccttttaaataacaataaattgctatttgaagaacatagtcttcca
gaattaaaaaacatgtctatgtatgaatggcaaaatattgttgatgaatacaaaggcatg
gtagttaccaatcctggatctaaaccctgttcaatacgcgtggatcaattagatcgagat
gctgtcaatgaaacaaatgaaaaaaactgtaatgatggatatcctgttatagttcatttt
ggcatccgacctcctcaattaagttatgctggaaacccagattatcagaagggatggcgt
gattatgtaaaatttagacatcttttggcaaatatgcccaaaccatcatttgaagataag
agaaaattagaaattaaagaaagagctttacaagagatgagatctcataataaaatgaaa
cgtggtgtgactgctgcagtgtctagtaaaggattttataaaactggtcttatgtgtgat
attgtacagcatgcaatgctattgccagtacttgtatgtcactttagatttcataaatca
ttagagtatcttgagaaaactctagagtataaattcaaaaataaatacttattgcaacta
gcattaacacatccatcatatagagaaaactttggtacaaatcctgatcatgccagaaat
acattaactaattgtggtattagacagccagaatacggggataggcgtatacactacatg
aatacacggaaaaggggtattaatactcttataaatataatgtctcggtttggcaaaaaa
tcagaaatggaatcaaatattatgcataatgaacgtttggaatttttaggtgatgctgtt
gttgaatttgtatcttctattcatctttttaatatgtttcctgatatcgaagaaggtggc
ttagcaacatttcgtgcagcaatagttcaaaaccagcatcttgctgttttagcaaaaaca
ctaaaacttgatgattttatgctatatgctcatggctcagacttatgtcatgattctgaa
ctcaaacatgctatggcaaattgttttgaagctttaatgggagcattatttttagatgga
ggaattgatgtagctgatcgtgtttttggaaaaacattttttcatgattcacctgaactc
cttgatatatgggttaattatccaaagcacccattacaacaacaagaacctaatggtgat
cgtaaatggataaaaactttacctttacttcaaaaattaactaagtttgaagattctatt
ggtattaagttcaaccacataagattattagctagggcatttactgacagaagtgttggt
tttacaaatttaactctaggttccaatcaacgtcttgaatttttaggtgatactgtttta
caattgattgcgtcagattacttgtataaatattttccagaacaccatgaaggtcatctt
tctcttttacgtagttcattagtaaataacagaacacaatctgtggtatgtgatgattta
ggaatggtaaattatgcactttatgctaaccccaaagctgaacttaaaactaaagacaga
gctgatttgttagaagcatttttgggagctttgtacattgataagggtctaaagcattgt
caagctttttgtaatgtttgtttttttcctcgtcttcatgactttatattaaaacaagat
tggaatgacccaaaatcaaaattgcaacaatgttgtttaacattgagatctgtagatggt
ggtgaacctgatattcctgtttataaagttatagaatgtatgggacctaccaatggaagg
aagtatacagtggctgtatactttaaaggagttagattatcacaggcaactgggcatagt
attcaaagagctgaaatgaatgctgcaaacagtgctttggaggtttctaaagatttgttt
ccacaactagatcatcaaagacgagcaatttcgagaagtctaagacatcaatgtaaatca
tctgatggacaaacaaatattgatgatattataaagatattagaatccaaatcattaaaa
aacgaaacaaaaatgagcaaattagattgggccaaaagaaaactccaaagaaaactatta
gcagttttatgttctaataaaatagaagataatgaagaaaccgatgaaccaaaaaagaaa
aaacaaaaaaaaaattaa
DBGET
integrated database retrieval system
