Daktulosphaira vitifoliae (grape phylloxera): 126903525
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Entry
126903525 CDS
T09738
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03018
RNA degradation
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126903525
09123 Folding, sorting and degradation
03018 RNA degradation
126903525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126903525
03041 Spliceosome [BR:
dvt03041
]
126903525
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126903525
mRNA degradation factors
5'-3' decay
Lsm complex
126903525
Spliceosome [BR:
dvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126903525
Complex C
U2 snRNP components
126903525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
126903525
NCBI-ProteinID:
XP_050537662
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLVDISVTDPEKYPHMASVRNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATIAR
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttactcatttttcaaatctcttgttgggaaggatgttgtagttgaactgaaa
aatgatttaagtatttgtggaacactgcattcagtcgatcaatatttaaatataaaatta
gttgatattagtgtcactgatccagaaaaatatcctcatatggcatcagtgagaaattgt
tttattcgtggatctgtagtacgctatgtacaattacctgcagatgaagttgacacacaa
ttgttgcaagatgctgcacgtaaagaagcaactattgctagataa
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