Daktulosphaira vitifoliae (grape phylloxera): 126903630
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Entry
126903630 CDS
T09738
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03022
Basal transcription factors
dvt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126903630
09124 Replication and repair
03420 Nucleotide excision repair
126903630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvt03021
]
126903630
03400 DNA repair and recombination proteins [BR:
dvt03400
]
126903630
Transcription machinery [BR:
dvt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126903630
DNA repair and recombination proteins [BR:
dvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126903630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
126903630
NCBI-ProteinID:
XP_050537907
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSKDSSSSKEKRKHLKKDDGSKILKVLTLFEYLTKLPEAVQDRLYSHPPTCLTVFRVLPD
IAQQFTLRILFIEQPVPQSVLSSWVPANYSNELEESIEVATNLHIWKLTGVSGGLKGWIL
NSTFKKKLKVALMGGGRSMVSNNEVTADPKARDVDFLDAYAYERWECILHYMVGSKNEGI
SADAVRVLLNAGLMVQDTDGSPVITSTGFQFLLLDMATQVWYFMLRYMETVESRGLDLAQ
CLTFLFQIHLGTLGWDYITDEMSENLQAFLQHLREFGLVYQRKRKAGRFYPTRLVIEMGQ
SSSRTSERMKNKERYIIVETNFRVYAMTDSDLKVALVALFTHMLYRFPNMAAGILTRDSV
RTALRSGITAAQIVRFLTVHAHPQMQESGIPQTVIDQIYLWENERNRLTFIDGVLYSNIN
TPNDYETIKNYAIEIGALVWCDEKRRNIVVSTDGHDDVRKFWKKQPKSDPF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagactctagttcgagtaaggaaaaacgtaaacatctgaagaaagatgatggt
tctaaaattcttaaagttttgacattatttgaatatcttactaaactaccagaagctgtt
caagatcgactttatagtcatccgccaacatgtttaactgtatttagagttttacctgat
attgcacaacaatttacattacgtatattgtttattgaacaaccagtaccacaatcagtt
ctttcttcttgggttccagctaattattccaatgaacttgaagagtctattgaagtggct
actaatctacatatatggaaacttactggagtctctggtggtttaaaaggttggattctt
aattcaactttcaaaaagaaacttaaagtagcgcttatgggaggaggccgttctatggta
tcaaataatgaagtgactgctgatcccaaagcaagagatgttgactttcttgatgcatat
gcatacgagaggtgggaatgtatattgcattatatggttggttctaaaaacgaaggcata
tcagctgatgctgttagagttttattaaatgctggtctcatggttcaagatactgatggt
agtccagtaattacatcaacaggatttcagttccttcttcttgatatggctactcaagtc
tggtattttatgcttagatatatggaaactgttgaatcacgaggacttgatcttgcccag
tgtctgacttttctatttcaaatacacttaggtactttaggatgggattacattactgat
gaaatgtcggaaaatcttcaagcatttttacaacacctgagagagtttggattagtatac
caaagaaaacgtaaagctggtcgtttttatccaacacgtttagttatagagatgggtcaa
agtagtagtcgaacatctgaacgaatgaaaaataaagagagatatatcatagttgaaact
aattttcgtgtatatgctatgactgattcagatcttaaagttgcattagttgcattattt
acccacatgctctataggtttcctaatatggctgctggtatacttacacgcgattcagta
cgtacagccttgcgtagtggtattacagcagctcaaatagtgagatttttgactgtacat
gctcatcctcaaatgcaagaaagtggtattcctcaaacagttattgatcaaatatattta
tgggagaatgagagaaatagactgacttttattgatggtgtgctgtatagcaatattaat
acaccaaatgactatgaaactataaaaaattatgctatagaaataggagccttggtatgg
tgtgatgaaaaaagacgaaatattgttgttagtacagatggacatgatgatgtaagaaaa
ttctggaaaaaacaacccaagtccgacccattttaa
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