Daktulosphaira vitifoliae (grape phylloxera): 126903773
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Entry
126903773 CDS
T09738
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126903773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126903773
03036 Chromosome and associated proteins [BR:
dvt03036
]
126903773
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126903773
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126903773
mRNA degradation factors
5'-3' decay
Decapping complex
126903773
Chromosome and associated proteins [BR:
dvt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
126903773
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
126903773
NCBI-ProteinID:
XP_050538214
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MIATNHNNSGITNHNMPSKQVNRISFEGIDDAGWKAKLKLPPPDKRIKTSDVTSTKGNDF
EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQV
DPKKDVIQALVIVPTRELALQTSQICIELAKHLDIRVMVTTGGTNLKDDILRIYQRVHVI
IATPGRILDLLDKSIAKVDQCRILVLDEADKLLSQDFKGMLDHIISRLPPERQILLYSAT
FPLTVKQFMDKHLRSPYEINLMEELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRKGSCRNLVCSDLFTRGID
VQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKP
IPKVIDPKLYVARPEDQEITEDMDLSK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctacgaatcataataactctgggattaccaaccacaacatgcctagtaaacaa
gtaaatagaataagctttgaaggtatagatgatgcaggttggaaggctaaactcaaactt
cctcctcccgataaacgaattaaaacaagtgatgtaacatccactaaaggaaatgatttt
gaagaattctgtttgaaacgtgagttattaatgggtatatttgaaaaaggttgggaaaaa
cctagcccaattcaagaagcaagtataccaattgcactctctggaaaagatatattggct
agagcaaaaaatgggactggaaaaactggtgcatattctataccggttcttgaacaagtt
gatcctaaaaaagatgttatacaagctcttgtaattgtaccaaccagagaattagcatta
caaactagtcaaatatgtattgaacttgcgaaacatttagatataagagttatggttaca
actggtggaacaaatcttaaggatgatattcttcgtatttaccaaagagtgcatgtaatt
attgcaacacctggaagaatattagatctccttgataaaagtatagccaaagtagatcaa
tgtcgaattctagttctagatgaggctgacaaacttttatctcaagattttaagggtatg
ctagatcacattatttctaggctacctccagaaaggcaaattttactttactctgcaaca
ttccctttaactgttaaacaatttatggataagcatttacgtagtccatatgaaattaat
ttaatggaagagttaacgttaaagggtgtaactcagtattatgcttttgtacaagaaaaa
caaaaggttcattgtctcaatactttattttcgaaattgcaaattaaccaaagtataata
ttttgtaactctactcaacgtgttgagttacttgcaaaaaaaatcacagatctcggctat
tgttgttattatattcatgctaaaatggcacaagctcatcgtaaccgtgtttttcacgat
tttaggaaagggtcatgtagaaatcttgtttgttctgatctttttacaagaggaattgat
gtacaagctgtcaatgttgttataaactttgattttcctaaaatggctgagacttatttg
catcgtattggacgatctggtcgctttggccatcttggtatagctataaatctaataaca
tatgatgatagatttgctttacatcgtattgaacaagaattgggtactgaaataaaaccc
attcctaaggttattgatcctaaattgtatgttgctcgaccagaagatcaagagataact
gaagatatggatcttagtaaataa
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