Daktulosphaira vitifoliae (grape phylloxera): 126904442
Help
Entry
126904442 CDS
T09738
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126904442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvt03041
]
126904442
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126904442
Spliceosome [BR:
dvt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126904442
Complex B
126904442
Complex C
U2 SnRNP specific factors
126904442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
Utp25_C
Asp_DH_C
CMS1
Motif
Other DBs
NCBI-GeneID:
126904442
NCBI-ProteinID:
XP_050539442
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MQNNRMNDKVSFAFNSSRSSSSRSSAIPPPPNSGISKQGYSTLNAINHSAISSTWGVPKK
RAKTEEEYFEEEDEHQHSQLDYIPAPDSPTNKKSFTDSDSSEDPLDAFMEDLEKEVKKEK
NSTKKKGTEEEKGIRQDIEDEDVEESYYRYMEENPTAGLVDDTSDIEIDYDEDGNPIAPP
KKKEIDPLPPIDHSLLEYKSFEKNFYVPHSEISALSVDKVVNLRKTLGLRVNGADLPYPV
SSFAHFNFDETLMKAIRKSEFTQPTPIQAQAIPAALSGRDIIGIAKTGSGKTLAFIWPML
IHIMDQPELKEGDGPIGLILAPTRELSQQIYTEVKKFGKIYNLRVVCCYGGGSKWEQSKA
LEDGTEIIVGTPGRVIDLVKMNATNLTRVTYLVLDEADRMFNMGFEPQVRSICDHVRPDR
QTLLFSATFKRKIEKLARDILTDPIRIIQGDIGEANTDVTQIMLVMPQNDKCQWLLNNIV
QFQSAGSILIFVTKKFDAEQLANTLTVKEYQVLLLHGDMDQAERNKVITKFKKQEVNILV
ATDVAARGLDIAHIKTVINYDIARDIDTHTHRIGRTGRAGEKGTAFTLVTSKDFEFAGHL
VRSLEGVGQEVPTPLLDLAMQSSWFRKSRFKGGKGKSVNAGGAGLGYQEPSGSNKYSNSS
SYQCPKPAATQKAAGPGAGRLMALKEAFKMQYQNQFRASEDHTWEQTVGSDPSASVKVHT
GPLKERKAKKNRWDN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaacagaatgaatgataaggtatcatttgcgtttaattctagccgatcatca
tcttcaagatcatcagctatacctcctccgcctaatagtggtataagtaaacaaggatat
tctactcttaatgctataaatcattcagcaatttcatcaacttggggagtccctaagaaa
cgagcaaaaaccgaagaagaatattttgaagaagaagatgagcaccaacattcacaactt
gattacatcccagcacctgatagtccaacaaataaaaagtcttttactgattctgactca
tctgaagaccctctagatgcatttatggaagatttagaaaaagaagtaaaaaaagaaaaa
aattctactaaaaagaaggggacagaagaagaaaaaggaataagacaagatattgaagat
gaagatgtagaagaatcttattaccgatatatggaggaaaatccaactgcaggactagtc
gatgatacatcagacattgaaatagattatgatgaagatggtaatccaatagcacctccc
aagaaaaaagaaatcgatcctctgcctcctattgatcattcattactagaatataaaagt
tttgaaaaaaatttttatgttcctcatagtgaaatatcagcattaagtgttgataaagta
gtaaatcttcgtaaaacacttggattacgagtaaatggagctgatttaccttatcctgtt
tcatcttttgctcattttaactttgatgaaactttaatgaaagctattcgtaaatcagag
tttacacaaccaactcctattcaagctcaggccataccagctgcattatctggaagagat
attattggaattgctaaaactggtagtggtaaaacattagcatttatttggcctatgtta
atacatattatggatcagcctgaattgaaggaaggtgatggacctattggactaatatta
gctcccactagagaattatcacaacaaatttatactgaagtaaaaaaatttggaaaaata
tataatttaagagtagtttgttgttatggtggtggttctaaatgggaacaatccaaagct
cttgaagatggtaccgaaataattgttggtactccaggcagagttattgacttagtcaaa
atgaatgcaactaatttaactcgtgtaacataccttgttttggatgaagctgatagaatg
tttaatatgggctttgaacctcaagttcggtctatatgtgatcatgtgagaccagataga
caaacattattgttttcagctactttcaaaagaaaaattgaaaaacttgctcgtgacata
ctgactgatccaatacgtatcattcaaggagatattggtgaagccaatactgatgttact
caaattatgttagtaatgccacaaaatgataaatgtcaatggcttttaaataatatagta
caatttcaatcagctggatcaattctcatttttgtcactaaaaaattcgatgctgaacaa
ctagcaaatactttgactgtaaaagaatatcaagttctactattacatggtgacatggac
caagcagaaagaaacaaagtaataacaaaatttaaaaaacaagaagtcaatatattggta
gcaactgatgttgctgcaagaggtctagacattgctcatattaagactgttataaactat
gatattgcacgagatattgacactcatactcatcgtattggaaggacaggtcgtgctggt
gaaaaaggtacagcttttactcttgtaacatctaaagattttgaatttgctggccattta
gtcagaagtttagaaggtgttggccaggaagttcccacaccactactggatcttgctatg
cagagctcttggtttcgaaaaagtcgctttaaaggtggtaaaggtaaatctgttaatgca
ggtggtgctggacttggatatcaagagccatctggttccaataaatactctaattctagt
tcataccaatgcccaaaaccagctgctactcaaaaagctgctggacctggagcaggtaga
cttatggctctaaaagaagcatttaaaatgcaatatcaaaatcagtttagagctagtgaa
gaccatacatgggaacaaactgttggatctgacccttcagcttcggttaaagttcacact
ggaccccttaaagaacgcaaggcaaaaaaaaatcgatgggataactaa
DBGET
integrated database retrieval system
