Daktulosphaira vitifoliae (grape phylloxera): 126904965
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Entry
126904965 CDS
T09738
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126904965
03015 mRNA surveillance pathway
126904965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126904965
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126904965
5.6.2.5 RNA 5'-3' helicase
126904965
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126904965
mRNA cycle factors
Common to processing body (P body) and stress granule
126904965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
ResIII
AAA_22
SLFN-g3_helicase
DEAD
NPHP3_N
ATPase
AAA_16
nSTAND3
Helicase_RecD
UvrD-helicase
P2
Ribosomal_S13_N
AAA
SRP54
AAA_7
AAA_6
PhoH
HisKA
T2SSE
NTPase_1
Motif
Other DBs
NCBI-GeneID:
126904965
NCBI-ProteinID:
XP_050540326
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MQSKDMWKFYHLVFWCGIYFITENYCIRTMAMYCAVVITLLKLIDYCTLFEKTDTKVIQI
NELNAEDDKLPSPRSPHSTVPATNIPCAFSSSKKYGHFFQPLISAECSYNLKLGEKHSFE
CKIVSSQNYNKKSKVRFQMNSKNNVFVVDEELWISSPKMTNAIKGIVTNFDQFMSVVDVE
VNFSIDLPIGTPATLKKSFDKTPYTRMEAALATFSYKYESVSPEVRSMLLGRQQQHSPER
DENLTDNSLLAPNLPGLNESQLSAVSHALRTPVSLIQGPPGTGKTVTCANIVYNLSKSGT
VLVCAPSNNAVDNLANAVAKTGIDVVRLVKKTKETVKSDLSSIYLSEQIKKLAGHSEFKT
LQGQIDQGVELSPNERRDYNYLRRMAEIDCLANCRVVCTTCSGAGDNRLEKINFSSVVVD
ECAQGLEPECIIPITHGAKKVVLIGDHCQLGPVVTCPDTRNGGLHRSLFERLVAAGLQPF
RLTVQYRMHPEISEYASQTMYESTIRNGVTCSDRTGSIDFTWPNPNVPMVFYSSDANERK
SRSGTSFLNYGEAKVVEQLVAKLLSKGATPNQIGVITPYEGQRSXLAKELLQIKLVL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaaggatatgtggaaattttaccatctcgtattttggtgtggaatttatttc
attacagaaaattactgcatcaggacaatggcaatgtattgtgctgttgtcataacactg
ttaaaacttattgattactgtacactttttgagaaaacggacacaaaagtcatacaaatt
aatgaactgaacgctgaagatgataaactaccatcgccacgttctccacattcaactgtc
cctgcaacaaatattccctgtgcattttcttcgtcaaagaaatacgggcattttttccag
ccattaataagtgctgaatgctcgtacaacttaaaattgggcgaaaaacattcgtttgaa
tgcaaaatcgttagctctcaaaactacaataaaaaatcaaaagtacgttttcaaatgaat
agtaaaaataatgtatttgtagtagacgaagaattatggatttcaagtccaaaaatgacc
aacgccataaaaggaattgttacgaactttgaccagttcatgagcgttgttgatgtagaa
gtaaatttttcaatcgacttgcctattgggacaccggcaactttaaaaaagtcatttgat
aaaaccccttacactcggatggaagcggcacttgctactttttcttacaagtacgaatct
gtttcacctgaagtaagatcaatgttgctcggacgtcaacaacaacattcacccgaacgt
gacgaaaatctgacagataacagcctattagctcccaacttacctggtttgaatgagtca
cagctgtctgctgtgagccatgccctacgcacgccagtttctctaatccaaggacctccc
ggtactggaaaaacggttacttgtgccaatattgtatacaatctgtccaagtccggaacc
gtattagtttgcgcaccgtcgaacaacgctgttgataacttggcaaatgccgtggctaaa
acgggcatcgatgtcgtgagacttgtgaaaaaaacgaaagagacggttaaaagtgatctt
tcaagtatatatcttagtgaacagataaaaaagcttgcgggtcattcagaatttaaaact
cttcaagggcagattgatcaaggtgtcgagttgagcccaaatgagagaagggactacaat
tatctgagaagaatggcggaaatcgactgtctagcgaattgtcgagtggtgtgcacaact
tgctccggcgccggcgacaaccgtttagaaaaaatcaatttttcttcggtggtcgtggat
gaatgcgctcaaggcttagaaccggaatgcatcattccaatcacccacggagccaaaaaa
gtggtgttaataggtgaccactgtcagttggggccggttgttacgtgtccggacactaga
aacggaggtctgcatcgttctctgttcgagagattggtagctgctggcctacaaccattt
cgtttaactgtacagtacagaatgcaccccgagatcagcgagtacgcttcacaaactatg
tacgagagtacgattaggaacggcgtaacttgtagcgaccgaactgggtcgattgatttc
acgtggcctaacccaaatgtgccgatggtattttactcttccgatgccaacgaacgaaaa
tcgcgatcgggcacgtctttcttgaactatggagaggcgaaagttgttgaacaactagta
gccaaactccttagcaaaggagctactccaaatcaaattggtgttataactccatatgaa
ggacagcgatcanccttggcaaaggagctactccaaatcaaattggtgttataa
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