Daktulosphaira vitifoliae (grape phylloxera): 126905060
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Entry
126905060 CDS
T09738
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126905060
03015 mRNA surveillance pathway
126905060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126905060
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126905060
5.6.2.5 RNA 5'-3' helicase
126905060
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126905060
mRNA cycle factors
Common to processing body (P body) and stress granule
126905060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
AAA_22
SLFN-g3_helicase
DEAD
NPHP3_N
ATPase
AAA_16
nSTAND3
Helicase_RecD
UvrD-helicase
P2
Ribosomal_S13_N
AAA
LSM
SRP54
AAA_7
UvrD_C_2
AAA_6
PhoH
HisKA
T2SSE
NTPase_1
Motif
Other DBs
NCBI-GeneID:
126905060
NCBI-ProteinID:
XP_050540409
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MAMYCAVVITLLKIIDYCTLFEKTETKVIQINELNAEDDKLPSPCSPHSTVPPTNIPCVF
SSSKKYGHFFQPLISAECSYNLKLGEKHSFECKIVSSQNYNKKSKVRFQMSSKNNVFVVD
EELWISSPKMTNAIKGIVTNFDQFMNVVDVEVNFSIDLPIGTPATLKKSFDKTPYTRMEA
ALATFSYKYESVSPEVRSMLLGRQQQHSPERDENLTDNSLLAPNLPGLNESQLSAVSHAL
RTPVSLIQGPPGTGKTVTCANIVYNLSKSGTVLVCAPSNNAVDNLANAVAKTGIDVVRLV
KKTKETVKSDLSNIYLSEQIKKLAGHSEFKTLQGQIDQGVELSPNERRDYNYLRRMAEID
CLANCRVVCTTCSGAGDNRLEKINFSSVVVDECAQGLEPECIIPITHGAKKVVLIGDHCQ
LGPVVTCPDTRNGGLHRSLFERLVAAGLQPFRLTVQYRMHPEISEYASQTMYESTIRNGV
TCSDRTGSIDFTWPNPNVPMVFYSSDANERKSRSGTSFLNYGEAKVVEQLVAKLLSKGAT
PNQIGVITPYEGQRSLLKQILNKNKGVEVSSVDAFQGREKEYIIISCVRSNERNVVGFLN
CVRRLNVALTRAKFGLFLVGNANFLVKNPTWKSLLRYYDDRNLIVEGTVDDMRTAHIKFD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtattgtgctgttgtcataacactgttgaaaattattgattactgtacactt
tttgagaaaacggaaacaaaagtcatacaaattaatgaactgaacgctgaagatgataaa
ctaccatcgccatgttctccgcattcaactgtccctccaacaaatattccctgtgtattt
tcttcgtcaaaaaaatacgggcattttttccagccattaataagtgctgaatgctcgtac
aatttaaaactgggcgaaaaacattcgtttgaatgcaaaatcgttagctctcaaaactac
aataaaaaatcaaaagtacgttttcaaatgagtagtaaaaataatgtatttgtagttgac
gaagaattatggatttcaagtccaaaaatgaccaacgccataaaaggaattgttacgaac
tttgaccagttcatgaacgttgttgatgtagaagtaaatttttcaatcgacttgccaatt
gggacaccggcaactttaaaaaagtcatttgataaaaccccttacactcggatggaagcg
gcacttgctactttttcttacaagtacgaatctgtttcacctgaagtaagatcaatgttg
ctcggacgtcaacaacaacattcacccgaacgtgacgaaaatctgacagataacagccta
ttagctcccaatttacctggtttgaatgagtcacagctgtctgctgtgagccatgcccta
cgcacgccagtttctctaatccaagggcctcccggtactggaaaaacggttacttgtgcc
aatattgtatacaatctgtccaagtccggaaccgtattagtttgtgcaccgtcgaacaac
gctgttgataacttggcaaatgccgtggctaaaacaggcatcgatgtcgtgagactcgtg
aaaaaaacgaaagagacggttaaaagtgatctttcaaatatatatcttagtgaacaaatt
aaaaagcttgctggtcattcagaatttaaaactcttcaagggcagattgatcaaggtgtc
gagttgagcccaaatgagagaagggactacaattatctgagaagaatggcggaaatcgac
tgtctagcgaattgtcgagtggtgtgcacaacttgctccggcgccggcgacaaccgttta
gaaaaaatcaatttttcttcggtggtcgtggatgaatgcgctcaaggcttagaaccggaa
tgcatcattccaatcacccacggagccaaaaaagtggtgttaataggtgaccactgtcag
ttggggccggttgttacgtgtccggacactagaaacggaggtctgcatcgttctctgttc
gagagattggtagctgctggcctacaaccatttcgtttaactgtacagtacagaatgcac
cccgagatcagcgagtacgcttcacaaactatgtacgagagtacgattaggaacggcgta
acttgtagcgaccgaactgggtcgattgatttcacgtggcctaacccaaatgtgccgatg
gtattttactcttccgatgccaacgaacgaaaatcgcgatcgggcacgtctttcttgaac
tatggagaggcgaaagttgttgaacaactagtagccaaactccttagcaaaggagctact
ccaaatcaaattggtgttataactccatatgaaggacagcgatcacttttgaaacaaatt
ctaaacaagaacaaaggggtggaagtcagtagtgtggacgcttttcaaggccgtgaaaag
gagtacattattatatcgtgtgtccgctcgaacgagagaaacgtcgttggtttcctgaac
tgtgtccgtcggctaaatgtggcacttacgcgtgcaaagtttggtctttttttagttggt
aacgctaactttttggttaaaaaccctacgtggaaaagtttactacggtattatgacgac
agaaatttgattgtggaaggaacagttgatgatatgcgtacagcacatattaagtttgat
taa
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