Daktulosphaira vitifoliae (grape phylloxera): 126905407
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Entry
126905407 CDS
T09738
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126905407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126905407
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126905407
mRNA cycle factors
Common to processing body (P body) and stress granule
126905407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
126905407
NCBI-ProteinID:
XP_050541037
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MVSIAAVQTLKKADQLKEQICASKDLNNSETLACQQQLRIIYKQLLMLDLEYALDQKVEQ
DLWNHGFKNNINKLQLLAKEKKSAKRNEWNALFLSCLESAYGFYLMLLHSICLTFDLDLP
FHKKLNDFCDMDNKIQSSTYLRKPQKSSCNYICQYCLVHLGDIARYRNQNRQAESFYRYA
VQLSPNSGQPYNQLALLEASRGDSLSTVFYYMRSINVKHPFLAAINNLNVTLNKYINSSQ
DMLYKTKISNTEFIQIFLAFHGVLMSKDSMKQQTSDGYIKSLALSFTPLIATESFTSFKL
QQMVAINVLAFNYISKDKSNVKVQCFPIIDLLATFLNAFLLPLYTLKEDQKFSEYYTLPA
VKLILDWIRNDLSVLNSPGFRSRLQIWPGLCKLLNGLTKDLNHENYTHISLPEDKLLQGF
TMLESVHSNLIFNSNNDPKINTNALRANRLIDFGIWFSATPNSLIKAIKQDNEKWSFEII
PNSSSNSHSIDLAADLETLSSYQQRLLINSSILPSSQNGDKRSGILKFQSNISDAKSVTS
NVAFESVIKKNQESEGKQVKFRTPSPSSSSGSEAKWSLEDLDQTSSEFEKDQNSIKPTPI
GYQLPHTPLKPNMNPLMNSFSHLHVNNLPTSSDNSYRFNQPLPNFSGWPQPPTNWIDNIK
TQNNQQKLQMFPFVQNQTSVGQFSNNVWSNINPSQINHNLPLQNNLNQFNLRDDQQRNFY
SNVNNSPYYSLFNQPNVMMTRNIDTNQDTNNISFSTFHQQSLWSGPGPSPLERLLEQQRG
RDSSEGGV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccatcgctgctgtacaaactttaaaaaaagctgaccagcttaaggaacaaatt
tgtgcgtctaaagacttaaacaattctgagactttagcttgccaacaacaacttagaata
atttacaaacaattgttgatgctagatttggagtatgcattggaccaaaaagtcgagcaa
gacctttggaaccatggattcaaaaataatattaataagcttcaacttcttgctaaagaa
aaaaaaagtgcaaaacgaaatgaatggaatgctttatttttatcttgtctagaatcagca
tatggcttctatctcatgctgttgcatagtatttgtcttacatttgatttagatttgcca
tttcacaaaaaactaaatgacttttgtgatatggataacaaaatacaaagctcaacatat
ttacgtaaaccacaaaaaagttcttgtaattatatttgccaatactgtttggtacactta
ggtgatattgctcgttatcgtaatcagaatagacaggctgaatctttttacagatatgca
gttcaactaagtcctaacagcggacagccatacaatcaattggctttattggaggcatca
cgaggagatagtttaagcacagttttctattacatgagaagtataaatgtcaagcatccc
tttttagcagctataaacaaccttaatgttacattaaacaaatatataaactctagtcaa
gatatgctgtataaaactaaaatttcaaacacagaatttattcaaatattccttgcgttt
catggagtgttgatgtctaaagatagcatgaaacaacaaacttctgatggttacattaaa
agtcttgcattatcatttacaccacttattgccactgaatctttcacgtcattcaagcta
caacagatggtggctatcaatgtgttggcatttaactacattagtaaagacaagtctaat
gttaaagttcaatgttttcctataatagatttattagctacttttctcaatgctttttta
cttcctttgtacaccttaaaagaagatcaaaaattttcagagtactacactttacctgct
gttaaactcattttggattggatacgaaatgatttaagtgttctaaactctcctggattc
cgaagtcgtctacaaatatggcctggcctttgcaaattgctcaatggtttaacaaaagac
ttaaatcatgaaaattatactcatatttctttaccagaagataaattacttcaaggattt
acaatgttagaatcagtacattcaaaccttatattcaactccaataatgacccaaaaata
aacactaatgctctaagagctaatcgtttaattgattttggcatatggttttcagcaact
ccaaattcattaattaaagcaattaaacaagataatgaaaagtggagttttgaaataatt
cctaatagttcgtccaattctcactcaattgatttagctgctgatttagaaaccttgtca
tcataccagcaacgtctattgataaattctagtattctaccatcatcacaaaatggtgat
aaaagaagtggtattctaaagtttcaatcaaacatctcagatgccaaatcagtaacaagt
aatgtagcctttgaatcagttattaaaaaaaatcaagagtcagaaggaaaacaagtgaaa
tttcgtactccttcaccaagctcctcatctggcagtgaagctaagtggtctttagaagat
cttgatcaaacatcatctgaattcgaaaaagatcaaaattctattaaaccgacacctatt
ggatatcagttgccacacacaccattaaaaccaaacatgaaccctctaatgaattctttc
agtcatctacatgtgaataatttaccaacttcatcagataattcttatcggtttaatcaa
cctctacctaatttttctggatggccacaacctcctactaattggatagataatataaaa
acacaaaacaatcaacaaaaacttcaaatgtttccttttgttcaaaatcaaacttcagtt
gggcagttttctaacaatgtgtggtcaaatattaatccttctcagatcaatcataaccta
ccattgcaaaataatttaaatcaatttaatttaagagatgatcaacaaagaaatttttat
agtaatgttaacaatagtccatattattcattatttaatcaacctaatgttatgatgact
agaaatatagatactaatcaagatactaataatatatcgttttccacatttcatcaacag
tctttatggtcaggacctgggccatcaccactagaacgtcttttagaacaacagcgtggt
cgtgattcttcagaaggtggggtttaa
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