Daktulosphaira vitifoliae (grape phylloxera): 126905857
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Entry
126905857 CDS
T09738
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03082
ATP-dependent chromatin remodeling
dvt03083
Polycomb repressive complex
dvt04213
Longevity regulating pathway - multiple species
dvt04330
Notch signaling pathway
dvt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126905857
03083 Polycomb repressive complex
126905857
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126905857
04350 TGF-beta signaling pathway
126905857
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
126905857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dvt03036
]
126905857
Enzymes [BR:
dvt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126905857
Chromosome and associated proteins [BR:
dvt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
126905857
HDAC complexes
Sin3A-HDAC complex
126905857
BRAF-HDAC complex
126905857
REST complex
126905857
SHIP complex
126905857
MiDAC complex
126905857
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
126905857
Heterochromatin formation proteins
Other heterochromatin formation proteins
126905857
Chromatin remodeling factors
NuRD complex
126905857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
126905857
NCBI-ProteinID:
XP_050541928
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MSITPFKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKFHSDEYIRFLRSIRPDNMNDYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAA
VKLNKQSADICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESIF
VPIITKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKRYGLPFLMVGGG
GYTIRNVSRCWTYETAVALGAEIANELPYNDYFEYFGPDFKLHISPSNMTNTNAAEYLEK
IKNRLFENLRMLPHAPGVQIQAIPEDAVRHDSDDEDTANPDDRNPQSLQDKRIAPDNEFS
DSEDEGMAAGVGGGGRKDNRSYKSGTPTRKQARLDSTKMEVDEPEFNIMKDDKEEKSVSS
DDSNKKDAVKS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctattactccattcaagaaacgtgtttgctattactacgatagtgacattggaaat
tattattatggacaaggacatccaatgaaacctcatagaattcgaatgactcataattta
cttttaaattatggcttgtatcgtaaaatggaaatttatagacctcataaagctactgca
gaagaaatgaccaaatttcatagtgatgaatacattagatttcttcgtagtattagacca
gacaacatgaatgactataataaacaaatgcaacgatttaatgttggtgaagattgtcct
gtttttgatggactctatgaattctgccaactatctgctggtggatcagttgctgcagct
gtaaaattaaataaacaatcagcagatatatgtattaattggggtggtggtcttcatcat
gcgaaaaaatctgaagctagtggattttgttatgttaatgatattgtattaggtatattg
gaattgctcaaatatcatcaacgtgtattatatatagatattgatgtccatcatggtgat
ggcgttgaagaagctttttatactactgatagagtaatgactgtgtcatttcataaatat
ggtgaatacttccctggaactggtgatcttagggatattggagctggaaaaggaaaatat
tatgccgttaatattccactaagagatggaatggatgacgatagttatgaatctatattt
gtacctattattaccaaagtaatggaaacatttcaacctagtgcagttgttttgcaatgt
ggagcagattcactaactggggatagactgggatgttttaatcttaccgtgaaaggtcat
ggaaaatgtgttgagtttgtaaagcgctatggtttgccttttttaatggttggtggagga
ggttatacaatcagaaatgtatctaggtgttggacttacgagacagcagtagctttaggt
gcagaaattgcaaatgaacttccttataatgactattttgaatattttggacctgatttt
aaacttcacataagtccatctaacatgacaaacacaaatgctgcagagtatttggaaaaa
ataaaaaacagactttttgaaaatttaagaatgctacctcatgcacctggtgttcaaatt
caagctattcctgaggatgctgtacggcatgattctgatgatgaagatacagctaatcca
gatgatagaaatcctcagtcattgcaagataaacgtattgcgcctgataatgagtttagt
gacagtgaagatgaaggaatggctgctggtgttggtggtggtggtcgtaaagataaccgt
tcatataaaagtggtacacccactagaaaacaagctcgtttagattcaacaaaaatggaa
gttgatgaaccagaatttaatataatgaaagatgacaaagaagaaaaatctgttagttct
gatgactcaaataaaaaagatgctgtaaaatcatga
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