Daktulosphaira vitifoliae (grape phylloxera): 126905928
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Entry
126905928 CDS
T09738
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03015
mRNA surveillance pathway
dvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126905928
09123 Folding, sorting and degradation
03018 RNA degradation
126905928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126905928
03041 Spliceosome [BR:
dvt03041
]
126905928
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126905928
mRNA cycle factors
Stress granule specific factors
126905928
Spliceosome [BR:
dvt03041
]
Complex C
Other components
Complex C specific factors
126905928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_10
POP1_C
Motif
Other DBs
NCBI-GeneID:
126905928
NCBI-ProteinID:
XP_050542044
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MASLYVGDLHSDVTEAMLFEKFSTVGAVLSIRVCRDMITRRSLGYAYVNFQNMADAERAL
DTMNFDVLKGRPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCK
VAQDETGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKELGQKAK
LYTNVYIKNLDENVTDEELFKMFEKFGTITSYKVMFREDGSSRGFGFVAFEDPEEAEKAV
IEWHGKESPEGKTYYVGRAQKKAERQQELKRKFEQYKIERMNRYQGVNLYVKNLDDTIDD
ERLRKEFSVFGTITSAKVMMDDGRSKGFGFVCFSSPEEATKAVTDMNGRIVGTKPLYVAL
AQRKEDRKAHLDSQYLQRNTNIRMQSIGPIYQPGGSSGYFVPTIPQPQRFFGPTQMTQIR
PQPRWAAQPQVRAGAPQATAAGYPNMATQYRNIGARAPVPAGQQAAMARNTMVDRNARPI
STTQQQIPGAVPAGGVRVPGVRGTGAGYKYTANMRNPPGQAQGIGQNQPGQPPAPVQAAV
HVHGQEPLTATMLATAQPEDQKQMLGERLFPLIQRMYPDLTGKITGMLLEIDNSDLLHML
EHHESLKSKVEEAVAVLQAHQAQQTQVKKE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttatatgttggtgatcttcattctgatgtgactgaagctatgttattcgaa
aagtttagcactgttggtgcggttttgtcaattagagtatgcagagatatgattactcgc
agatcgttgggatacgcctatgtcaacttccaaaacatggcggatgctgagcgtgcattg
gataccatgaattttgatgtacttaaaggacgccctatgagaattatgtggtcacaaagg
gacccttctttgagaaagtcgggtgttggcaatgtatttataaaaaacttagatagaagc
atagacaacaaagccatgtatgatacattctctgcctttggaaatattttaagctgtaaa
gttgctcaagatgaaactggacagtctaaaggatatggctttgtacattttgaaatggaa
cagtctgctactcaatcaattgagaaagttaatggaatgttacttaatggtaaaaaagta
tttgttggaagatttgttggtagaaaagatcgtgaaaaagaattgggccaaaaagcaaaa
ttatacacaaatgtgtatataaaaaatttggatgaaaatgttactgatgaagaattattt
aaaatgtttgaaaaatttggtacaatcactagttataaagtaatgtttagagaagatggt
agttctagaggatttggatttgttgcttttgaagatcctgaagaagctgaaaaagctgta
attgaatggcatggaaaagaaagtcctgaaggaaagacttactatgtaggacgtgcccaa
aaaaaagctgaacgccagcaagaacttaaacgtaaatttgaacaatacaaaattgaaaga
atgaatagatatcaaggcgttaatttatatgtgaaaaatttggatgacacaattgatgat
gaacgtttgcgaaaagaatttagtgtttttggaaccattacaagtgccaaagttatgatg
gatgatggtcgaagcaaaggatttggttttgtttgcttttcttctccagaagaagcaact
aaagcagttactgacatgaatgggcgtattgtaggaactaaacctttgtatgttgctcta
gctcaacgtaaggaagatcgcaaagctcatttggactcccaatatctacaacgcaatact
aatattcgtatgcagtctattggtccaatatatcagcctggtggctctagtggttatttc
gtccctacaattccacaacctcaacgtttctttggaccaacacagatgactcaaattcgt
cctcaacctagatgggctgctcaacctcaagttagggctggtgcccctcaagcaacagct
gctggttatccaaatatggctacacaatacagaaacattggtgcacgagctccagtgcca
gctggccaacaagcagcaatggctagaaacaccatggttgatcgaaatgctagaccaatt
agtacaactcagcaacaaataccaggtgctgttcctgctggaggagttcgtgttcctgga
gtccgaggaactggtgctggttacaagtacacagctaacatgcgtaatccacctggtcaa
gcacaaggtataggccaaaaccaaccaggtcaaccaccagcaccagtgcaagctgctgtg
catgttcatggacaagaaccattaacagcaactatgttggctacggctcagcctgaagat
caaaagcaaatgttgggtgaacgattattcccacttattcagcgcatgtatccagacttg
actggtaaaattactggtatgttattggagattgataattctgatttgcttcacatgttg
gaacatcatgaatctttaaagagtaaagtagaagaggcagttgctgtgcttcaagctcat
caagcacaacagactcaagtgaaaaaagaataa
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