Daktulosphaira vitifoliae (grape phylloxera): 126906186
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Entry
126906186 CDS
T09738
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126906186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126906186
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126906186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
XhlA
Nup54_C
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
126906186
NCBI-ProteinID:
XP_050542499
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MTGFGFNTSTANAFGSGINAQTSSGPFGFGASTTSATPSFGFGSSVGTAPTTSFGFGAPT
TIATSSFGFGSTTSATPAFSFNTSGATSTQPQSIFSGLGQTQPGLSATPSFGGTFGSSFG
AKPFGSTTTTTASPFNLTSFQGNTTQLQQQHQTPNINDTVINSIVNCKLFDDERDQIICK
LNLLQACWGTGKGYYALNNTPPVEYTPQNPLCRFKAITYSVKPTSSSRDALVAIVINKKM
DEIRKQEAQLTSNLFAILGSKPNFSVHLDTLKWYTETKSMALIFVEEKLQNGNSKRVSSN
DVVNYLMQPAPKQQLTTMGVENIFPYAGFTEENLREYFENPPAGIDLRVWKQAQIDNPNP
TVFIPVPIVGFSELCWKYKCHNEQVTVHKMALNSISDRLNELARKKTRVESKLEQYTDKM
DQLTHRIVKVLVGQMVILNAGMALRPEEETIKNQLEVLYNDINSPLRFQGKLTEIATLVR
LKNSELSDDSKCSTGYIPQVAEEIKHFLELQQRMIAEMQTVVREDFNALKLMKETLSNVK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgactggatttggttttaatacatcaactgcaaatgcttttggttctggaatcaatgct
caaacttcatctggtccatttggttttggagcttctactacgtctgctacaccatcattt
ggatttggatcttcagtaggtactgctccaacaacatcttttggttttggtgctccgact
acaattgccacatcatcttttggatttggatccactacatctgcaacacctgcattcagt
ttcaatactagtggtgctacatccactcagccacaatctattttttctggtttgggacaa
actcaacctggattatcagctacaccatcttttggaggaacttttggctcatcattcgga
gctaaaccatttggttctactaccacaacaacagcatccccttttaatttaacatcattt
caaggaaataccactcaactacagcaacaacatcaaacgccaaatataaatgatacagtt
attaattcaattgtaaactgtaaattattcgatgatgagagagaccaaataatttgtaaa
ctaaacttattacaagcatgttgggggactgggaaaggatattacgcattaaacaatact
ccgccagttgaatatactcctcaaaatccactttgccggtttaaagctatcacttacagt
gtcaaaccaacatcatctagtcgagacgcccttgtagctattgtaattaacaaaaaaatg
gatgagataagaaaacaagaagcacagttaacatcaaatttgtttgctatcttgggaagt
aaaccaaattttagtgtacatttagatacattaaaatggtatacagaaaccaaatctatg
gctctcatatttgttgaagaaaaattacaaaatggtaattcaaaaagagtatcaagtaat
gatgtagtaaattatttaatgcaacctgctccaaagcaacagttgactactatgggagta
gaaaatatatttccatatgcaggatttaccgaagaaaacttacgtgaatactttgaaaat
cctccagcaggtattgatttaagagtttggaaacaagctcaaatagacaacccaaacccc
acagtattcattcctgttcctatagtaggattctcagagttatgttggaaatataagtgt
cataatgaacaagttactgtacacaaaatggctctcaacagtatttctgatcgtctaaat
gagttagctagaaaaaaaactagagttgaatcaaaacttgaacaatacactgataaaatg
gatcagttgacccatagaatagttaaagttttagttggtcaaatggttatattaaatgct
ggaatggctctaagacccgaagaagaaactattaaaaatcaactggaagtattgtacaat
gatattaattcacctttaaggtttcagggaaagttaacagaaatcgctactcttgttaga
ttaaagaattcagagttatcggatgattctaaatgtagtacagggtatattccacaagtt
gctgaagaaattaagcattttctagaactacagcaaagaatgatcgcagaaatgcaaact
gttgttagagaagattttaatgccttaaaactgatgaaagaaaccttaagtaatgttaaa
taa
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