Daktulosphaira vitifoliae (grape phylloxera): 126906566
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Entry
126906566 CDS
T09738
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126906566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvt03041
]
126906566
Spliceosome [BR:
dvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126906566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
PRP4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Ge1_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_like
WDR54
Beta-prop_WDR75_2nd
CHD1-like_C
Motif
Other DBs
NCBI-GeneID:
126906566
NCBI-ProteinID:
XP_050543103
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDDEEITYVKKPKTIHYGSLEDQERVRLAALSTSENDEEPKSSGNINISNEYFDLEDAM
SKDKQALLEEFERKKKARQVQVSTDDDDVKKSLRKLDQPICLFSEGPAERRNRLRELLSR
VGEDIILKKPEEEKEKRQQIKDQDTTWYHEGPPSLLDARLFIAEFSLLRSHFRLEKLREE
ASIPESTLTARLQDLHKYTTSLSIYCSQIGDTRPISYCRFSPDSQFIATSSWSGLCKLWS
VPDCNLVKTFRGHNCNVCCITFNPNANSCENGCDLVSCASDGSVKLWSMDSKKEEPIADL
EGHAPFRVSRAIFHPSGRFLGTCCHDNSWRLWDLEQAEEVLHQEGHCKPVYCMSFQCDGS
IVATGGLDAFGRVWDLRTGRCIMFMEGHLKSIYSLDFSPNGYQLATGSEDNTCRIWDIRK
RACLYTIPAHMNLVSGLRYQPDGGHFIVTSSYDNTIKIWANKTWQMLKTLSGHDNKIMGV
DISPDSKFIASSSYDRTFKLWAPEYSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagaaattacttatgttaagaaacctaaaaccattcattatggatct
ctagaagatcaagaacgggttcgtttagcagcattaagcacatctgaaaatgacgaggaa
ccaaaatcaagtggaaatatcaacatttcaaatgagtactttgatttggaagatgctatg
tccaaagataaacaagctttgttagaagagtttgaaagaaagaaaaaagctaggcaagtg
caagtatctacagacgatgatgatgttaaaaaaagtctaagaaaattggatcaacctatt
tgcttatttagtgaaggtccagctgaaagaagaaacagattacgtgaattattatccaga
gtgggagaagatattattttaaaaaaacccgaagaagagaaagaaaaaagacagcaaatt
aaagatcaagacactacatggtaccatgaaggacccccatcattattagatgctcgatta
tttatagctgagttttccttactgagatcacattttaggttagaaaaattaagagaagaa
gctagtattcctgaatctacattaactgctcgtttgcaagatttacataaatatactact
tctttatcaatatattgcagtcaaattggtgatacaagacctatatcttactgcagattc
agcccagattctcaatttatagccacatcttcttggagtggtttgtgtaaactatggtca
gttcctgactgtaatttagttaaaacttttagaggtcataattgtaatgtttgttgtatt
acattcaatccaaatgcaaattcttgtgagaatggttgcgatcttgtatcatgcgctagt
gatggttcggtgaaattgtggtcaatggatagcaaaaaagaagagccaattgctgatctt
gaaggtcatgctccatttagagtatcacgagcaatttttcacccatcaggaagatttttg
ggtacatgttgtcatgataattcatggcgtttatgggatttagaacaagcagaagaagtg
cttcatcaggaaggtcattgtaaaccagtttattgtatgtcattccaatgtgatggttca
atagtagctacaggaggtttagatgcatttggtcgagtttgggatttgcgtactggcaga
tgtatcatgtttatggaaggccatttaaaatctatctacagtcttgatttttctcctaat
ggataccaattagctactggtagtgaagataatacttgtcgtatttgggatattaggaaa
agagcttgtctttatactatacctgcacatatgaatcttgtttccggattaagatatcag
cctgatggtggtcatttcattgttacctcctcttatgataataccattaaaatttgggca
aataaaacttggcaaatgttaaaaaccttatctggacatgataataaaattatgggtgtg
gatatatcacctgattcgaaatttatagcttcttcatcttatgatcgtacatttaaatta
tgggctccagaatactcaagttaa
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