Daktulosphaira vitifoliae (grape phylloxera): 126906916
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Entry
126906916 CDS
T09738
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126906916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvt03041
]
126906916
Spliceosome [BR:
dvt03041
]
Complex B
Other components
Prp19-related factors
126906916
Complex C
126906916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH_4
zf-CCCH
RRM_3
RRM_YTH1
Nup35_RRM_2
zf-CCCH_10
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
126906916
NCBI-ProteinID:
XP_050543815
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLSKTTNTYNRQNWEDSDFPIVCETCLGDSPYLRMTKEKYGKECEVCARPFTVFRWCPG
ARMRFKKTEICQTCARLRNACQTCLLDLEYGLPLQVRDAALKIKEQIPKSDVNKEYFVQN
MEAELAKMDEAGGKCQNASDVLAKMARKAPYYERNRPHICSFWVKGECRRGEECPYRHER
PTDPEDPLSNQNFKDRYYGVNDPVAEKMMNRASEMPKLEKPEDQTITTLYIGNLNDITTE
KDLRDVFYQYGEIRNITHVAHQNCAFIQYTTRAAAEIAAESTYGRLTLGGHKLNVRWGHA
QARKDKEGNISGAMKETKMKPTPGLPAPLPPLPSELQNNFFNLTPQSVPVVATSYIPVMP
PLPHPSLHYM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtctaaaacaacaaatacatataatcggcaaaattgggaagattctgatttt
ccaattgtatgtgaaacttgtctaggagatagtccttatttacgaatgactaaagaaaaa
tatggtaaagaatgtgaagtgtgtgctcgaccatttactgtatttcgttggtgtccaggt
gcaagaatgcgttttaaaaagactgaaatttgtcaaacttgtgctcgtcttaggaatgct
tgccaaacatgtctcttggatcttgaatatgggttgcctttacaagtgcgcgatgctgca
ttaaaaattaaagaacaaattccaaaatctgatgtcaataaagaatattttgttcaaaat
atggaagctgaattagctaaaatggatgaagctggtggaaaatgtcaaaatgccagtgat
gtattagcaaaaatggctcgcaaagcaccttattatgaaagaaatagacctcacatttgt
tcattttgggtaaaaggtgaatgccgtagaggtgaagaatgtccatatcggcatgaaaga
ccaactgatcctgaagatccactctcaaatcaaaacttcaaagataggtactatggagtt
aatgatcctgttgccgaaaaaatgatgaatagagctagtgaaatgcctaaattagaaaaa
ccagaagaccaaactattacaactttgtacattggaaatcttaatgatataactactgaa
aaagacttaagggatgtattttaccaatatggtgaaattcgtaacattactcatgtggct
catcaaaattgtgcctttatccaatatacaactcgcgctgctgctgaaatagcagcagaa
agtacttatggccgtttaacattaggtggtcataaattaaatgtacgatggggccatgct
caagcccgtaaagataaagaaggaaatatttcaggtgcaatgaaagaaacaaagatgaag
cctactcctggtttacctgctccattacctcctctgccatctgaattgcaaaataatttt
tttaatttaactccacagtcagtacccgttgttgcaacatcatatataccagttatgccc
ccattacctcatcctagtttgcattatatgtaa
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