Daktulosphaira vitifoliae (grape phylloxera): 126906954
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Entry
126906954 CDS
T09738
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126906954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126906954
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126906954
U7-dependent histone pre-mRNA processing factors
126906954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Baculo_FP_2nd
Motif
Other DBs
NCBI-GeneID:
126906954
NCBI-ProteinID:
XP_050543874
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTSIIKFYTLSGAMDESPPCYLLQIDEFKFLLDCGWDERFNMGLINKLKRYIHQIDAVLL
SHPDRFHLGALPYLVGKCGLNCPVYATIPVYQMGQMFMYDLYQSMYNMEDFDLFNLDDVD
AAFDKVVQVKFNQIITLKGKGIGMSIVALPAGNMVGGTIWKISKVGEEDIVYAIDFNHKK
ERHLNGSDLEKLTRPSLLILDCFNAAYSQARRRSRDETLMTNILTTLRNKGNVLIAIDTA
GRVLELMHMLDQLWRNKESGLFVYSLVFLTNVSYNTVEFAKSQIEWMSDKLMKSFEGARN
NPFFFKHVKLCHNMNDLNKVPEPKVVLASNADLECGFSREVFLMWSSKPKNSIILTHRTA
PGTLARDLIDRGGNRNLKLRIKKRIPLEGRELEEYNRKHNTKILDTDKNAPESSDSEDEI
VPMRGKHDLLVDIDQSISAKFTKKEVAPIFPYYEEKYKFDAYGEIIKQEDFIKFDMSYAD
DLNPDGQNNKPDDDEEEVDPYDLPSKCVEYEQTIHIVAKISHIDFEGRSDGESLKQIILS
LRPRRLLLIRGTATSTKTVSNFTKVFSDSKVFAPKVGQCLNVTTESHIYQVCLTDTLLST
IDFKKGHNGELAFIDAKLKLKEEVADDNTMDVDGIQPDKSLRMDEQLYTLEPLPKSEVPP
HKTIFINQLKLSDFKQILSKNNIPCELSEGVLWCCNRTVCVRRNASGKVLMEGIISRNYY
LIRSLLYSQFIVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacatccattattaaattttatacgttatcgggtgctatggatgaatcgcctccttgt
tacttattacaaattgatgaatttaaattcttattagattgtggatgggacgaacgtttt
aacatgggtttaattaacaaattaaagaggtatatacatcaaattgatgcggttttatta
tcacatcctgatcgctttcatctaggcgctcttccataccttgttggtaaatgtggtcta
aattgtcctgtctatgccactattccagtttaccaaatgggtcagatgtttatgtatgac
ttgtatcaatccatgtacaatatggaagattttgatctttttaatttggatgatgttgat
gctgcttttgataaagttgttcaagttaaatttaatcaaattattacactaaaaggtaaa
ggaattggaatgagtatagttgccctaccagccggtaatatggtaggtggaacaatttgg
aagatatcaaaagtaggcgaagaagatattgtttatgcaattgactttaatcataaaaaa
gagagacatttgaatggaagcgatttggaaaaacttactcgtccatcattattaatttta
gattgttttaatgcagcttactcacaagctagacgtagatcaagagatgaaaccttaatg
accaatattttaactactctacgtaataaaggtaatgtcttaatagcaattgatactgct
ggtcgagttcttgaactgatgcacatgttagatcaattatggcgaaataaagaatcgggt
ctttttgtttattctttagtgtttttgactaatgttagctataacactgttgaatttgct
aaatcacaaatcgaatggatgagtgataaattaatgaaaagttttgaaggagcaagaaac
aatccttttttttttaaacatgttaaattatgtcataacatgaatgatttgaataaagtt
ccagaacctaaagttgtattagccagcaatgctgatttagaatgtggattttctcgtgaa
gtttttcttatgtggtcatctaaaccaaaaaatagtattattcttacccatagaactgct
cctggtacattagcacgcgatttaattgatcgtggtggtaataggaatttaaaattaaga
attaagaaaagaataccattagaaggtagagaactagaagaatataacagaaaacataac
actaagatattagatactgataaaaatgctccagagagttctgattcagaagatgaaatt
gtacctatgagaggtaaacacgatttattagtagatattgaccaatcaatttccgctaaa
tttacaaaaaaagaggttgcccctatatttccctattatgaagaaaaatacaaatttgat
gcctatggagaaataataaagcaggaagatttcataaaatttgatatgagttatgcagat
gatttgaatccagatggtcaaaacaataagcctgatgatgatgaagaagaagttgatcct
tatgatcttccatctaaatgtgtggaatacgaacaaactatacacattgttgcaaagatt
tctcatattgattttgaaggacgttctgatggcgaatctttaaaacaaataatactttca
cttaggcccaggcgattgttgttaatacgtggtactgcaacgagtaccaagacggtttca
aattttactaaagtattttcagatagtaaagtttttgcacctaaagttggtcagtgctta
aatgttactactgagtcacatatttatcaagtgtgcttaactgatacacttctttcaact
attgattttaaaaaaggtcataatggagaattggcatttattgatgcaaaactcaaatta
aaggaggaagtagcagatgacaatactatggatgttgatggaattcaacctgacaaatct
ttaagaatggatgaacaattgtatactctagaacctttaccaaagtctgaagtaccacct
cataagacaatattcattaatcaactgaaactatcggactttaaacaaattttatccaaa
aataatataccttgtgaactttcagaaggtgttctttggtgttgtaatcgtacagtttgt
gttcgtcgaaatgcatctggaaaagtacttatggaaggaataattagtcgaaattattat
ttaatacgcagtcttctgtacagtcaatttatagtaatatga
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