Daktulosphaira vitifoliae (grape phylloxera): 126907115
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Entry
126907115 CDS
T09738
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126907115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvt03041
]
126907115
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126907115
Spliceosome [BR:
dvt03041
]
Complex A
U2 snRNP components
U2 related factors
126907115
Complex B
126907115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
126907115
NCBI-ProteinID:
XP_050544144
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MVRSSSDRSYRKRSRSRSRSPRRHRRSRSRSRSPRHKAHKSTRERKKSRSPRHSRSPRSK
RKTPERKPEDVTFDPTNPDKETEQKKLELEMQKRRERIERWRAERKKKELDSVKKDIRAN
IMSNIQIPSKKWNLEDDSDEEDEGKNNTDKVVEEEEIDPLDAFMQGVQEEVRKVNKVDGH
RSNLPDKNTLNEIGQSPGVDTTSSGVVIVSGVAKKKDNNTRGELIEQNQDALEYSSEEEQ
EDLNVAAASLANKQKKELPKIDHSDIAYIPFRKNFYVEVPEITRMTSEEVEKYKEELEGV
QVKGKGCPRPIKVWAHCGVSKKIMDNLKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGS
GKTLAFLLPMFRHILDQPPLSDTDGPIAIVMAPTRELCMQTGREARKFTKSLGLRVVSVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYIVLDEADRMFDMGFE
PQVMRVIDNVRPDRQTVMFSATFPRQMEALARRILQKPIEVQIGGRSVVAKEVEQHVLIV
EEEQKFMKLLEVLGNYYEKGSCIVFVDTHENADTLLQKLLKASYPCMALHGAIDQYDRDS
TIVDFKSGQVKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAY
TLVSPDQERFAGDLIRALETSNVSVPDSLRTMWLRYQAKQAAEGKQVHKGGGFSGKGFKF
DETEAVMANEKKKLQKAALGLQDSDDEDIEGDIDQQIETMLAPKRIVKEVKASAIGLPNL
TGLMESNGTPQASERLELAKRLASRIHIAKNLGPDAKGASQQTAEAILKGGLASSQPVIT
AKTVAEQLAAKLNTRLNYQPKDDDGETDFTDIAENGGEEVFRKYEEELEINDFPQQARWR
VTSKEALAQISEYSEAGITVRGTYYPPPKNPPEGERKLFLAIESTDELAVSKAKIEITRL
IKEELLKMQTSAHHMINKARYKVL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagtagcagtgatagaagttatcgtaaacgatctagaagtcgttcacgtagt
ccgcgtcgacaccgccgcagccgttctagatcaaggtctccacgtcacaaagcacacaaa
tcaacgagggaaagaaaaaagtcaagatctcctcgtcattcacgatctccgcgtagtaaa
agaaaaacaccagaacgaaaaccagaagacgttacatttgacccaactaatccagataag
gaaactgagcaaaaaaaacttgaattagaaatgcaaaagcgtcgtgaacgtattgaacgt
tggagagctgaacgcaagaaaaaagaactagacagtgttaaaaaagatatcagagctaat
ataatgtctaatatacaaataccatcaaaaaagtggaatcttgaagatgatagtgatgaa
gaagatgaaggaaaaaataatacagacaaagttgtcgaagaagaagaaattgatcctctc
gatgcatttatgcaaggtgtacaagaagaagtacgtaaagttaataaagtagatggacat
cgaagtaatttgcctgataagaatactttaaatgagattggacaaagcccaggagttgac
acaactagttcaggggtcgttattgtttctggagtggctaaaaaaaaagataataatact
agaggagaacttattgaacaaaatcaagatgcattagaatattcctctgaagaagaacaa
gaagatttaaatgttgctgctgctagtttagcaaataagcaaaaaaaagaattacctaag
atagatcattcagatatagcatacataccatttaggaaaaacttttatgttgaagtacca
gaaataactcgaatgacatcagaagaggttgaaaaatataaagaggagttagaaggtgtt
caagtaaaaggtaaaggatgccctagacctattaaagtttgggctcattgtggtgttagt
aaaaagattatggataatttaaaaaagcacaattatgagaaacctactccaattcaagct
caagcaatacctgctataatgtctggtcgtgatcttattggtattgctaaaactggaagt
ggtaaaactttagcatttttattgcctatgtttaggcacattttagatcaacctccttta
tcagatactgacggaccaatagcaattgttatggcacctacaagagaactctgtatgcaa
actggtagagaagctcgtaaatttactaaaagtttaggattacgggtcgtatcagtttat
ggaggtactggaatatctgaacaaattgcagaattaaaaagaggtgctgaaataattgta
tgtaccccaggaagaatgattgatatgttagcagcaaataatggtagggttactaatttg
agacgcgtaacatacattgtattagatgaagctgatcgtatgtttgatatgggctttgaa
ccccaagttatgagagtaattgataatgttcgtccagatcgacaaacagttatgtttagt
gccactttccctcgtcaaatggaagccttagctagaagaatattacaaaagcctattgaa
gttcaaattggtggtagaagtgttgtggctaaagaagttgaacaacatgtattaatagtt
gaagaagaacaaaaatttatgaaactattagaagtgttgggtaattattatgaaaaagga
agttgtattgtatttgtagatactcatgaaaatgcagatactctgttacaaaaactatta
aaagcatcttatccttgtatggctttacatggtgctattgatcagtatgatcgtgatagt
actatagtagattttaaaagtggtcaggtcaaattattagttgctacttcagttgctgca
agaggactagatgttaaagatttgatattggtggtaaactatgactgtccaaatcattat
gaagattatgttcatagatgtgggagaactggaagagctggtaataaagggtatgcttat
acattagtttctcccgatcaagaaagatttgctggagatttaatcagagccttagaaaca
tctaatgtatctgtcccagattctttacgaactatgtggttacgttatcaagcaaaacaa
gcagctgaagggaagcaagttcataaaggtggaggttttagtggaaaaggtttcaaattt
gatgaaacagaagctgtaatggcaaatgaaaagaaaaaacttcaaaaagctgctcttgga
cttcaagattctgatgatgaagatatagaaggagatattgaccaacaaattgaaactatg
ttagctcctaaacgaattgtgaaagaagttaaggctagtgctataggtcttccaaattta
acaggcttaatggaatctaatggaacaccacaggcatctgaaagattagaattagcaaaa
cgtttagcctctcgtattcatattgctaaaaatcttggtcctgatgctaagggagcatca
cagcaaacagctgaagctatattaaaagggggtcttgctagctcacaaccagtcataaca
gctaaaacagtagcagaacaattagcagctaaattaaacacgaggctcaattatcaacct
aaagatgatgatggtgaaactgattttacagacattgcagaaaatggtggtgaagaagtt
tttagaaaatatgaggaagaattagaaataaatgatttcccacagcaggccagatggaga
gtcacatctaaagaagcattagcacaaatatcagaatattctgaagctggcataactgtt
agaggaacatattacccaccacctaaaaacccccctgaaggagagcgaaagctgttttta
gctatagaaagtacggatgaattagctgtatctaaagctaaaatagaaattactcgtctc
attaaagaggaattattaaaaatgcaaacatctgcacatcatatgattaataaagcccga
tataaagttttgtaa
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